DRSC/TRiP Functional Genomics Resources

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Protein Alignment puf and Usp12-46

DIOPT Version :9

Sequence 1:NP_001262923.1 Gene:puf / 42935 FlyBaseID:FBgn0039214 Length:3930 Species:Drosophila melanogaster
Sequence 2:NP_651099.1 Gene:Usp12-46 / 42702 FlyBaseID:FBgn0039025 Length:424 Species:Drosophila melanogaster


Alignment Length:483 Identity:102/483 - (21%)
Similarity:157/483 - (32%) Gaps:179/483 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly  2001 DYWPRDEGRAECGYVGLTNLGATCYMASCVQHLYMMPQARAAVLRVPPNAARKHGP--TLLELQR 2063
            |.:|.:|     .|.||.|.|.|||..|.:|.||.....|..||..   .|:...|  |||....
  Fly    15 DLFPPNE-----HYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEY---KAKNKRPKETLLSCLA 71

  Fly  2064 MFAYLLESERK---SYNPRSFCRVYQMDHQPLNTGEQKDMAEFFIDLVSKLEDM----------- 2114
            ...|.:.:::|   |..|:.|....:.:.:..:...|:|..||...|::.:.::           
  Fly    72 DLFYSIATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNAGPSN 136

  Fly  2115 ----------------------------------------------------------------- 2114
                                                                             
  Fly   137 GNPKATNQGGSTSAMASSIASKSSSTSNSNSNSNSTTNSNGNSSNSTGSLNANTSVLDASGSLTA 201

  Fly  2115 --TPDLK-------------HLVKRLFCGSLSNNVVSLDCGHVSRTAEDFYTVRCQVADMRNLQE 2164
              ||.:.             ..|..:|.|.|::....|:|..||...|:|:.::..|....::..
  Fly   202 TTTPIISGNGTGTNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNTSITH 266

  Fly  2165 SLDEVTVKDTLEGDNMYTCSQCGKKVRAEKRACFKKLPQILCFNTMRYTFNMVTMLKEKVNTHFS 2229
            .|...:..:||..||.:.|..|.....|:||...||||.||..:..|:.:      .|:.|.|..
  Fly   267 CLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKY------MEQFNRHIK 325

  Fly  2230 ------FPLRLNMCHYVEKTLMPQQYKEERERRQKEKEGADGSGDGNDNEKAEATLDDDIEECYE 2288
                  |||.|.:.:                                       |.||.:.....
  Fly   326 VSHRVVFPLELRLFN---------------------------------------TSDDAVNPDRL 351

  Fly  2289 YELVGVTVHTGTA-DGGHYYSFIKERTKTSYHTHERWFLFNDAEVKPFDPSQIAAECFGGEMTSK 2352
            |:|..|.:|.|:. :.|||.|.:|        :|..|.||:|..|...:.|.|  |.|.| :||.
  Fly   352 YDLTAVVIHCGSGPNRGHYISIVK--------SHGLWLLFDDDMVDKIEASTI--EDFYG-LTSD 405

  Fly  2353 TYDSVTEKYLDFSFEKTNSAYMLFYERR 2380
            .:.|            :.:.|:|||:.|
  Fly   406 IHKS------------SETGYILFYQSR 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pufNP_001262923.1 peptidase_C19C 2013..2382 CDD:239124 99/471 (21%)
UCH 2014..2377 CDD:278850 96/465 (21%)
DUF3517 2723..>2877 CDD:288853
Usp12-46NP_651099.1 Peptidase_C19G 25..419 CDD:239128 96/464 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24006
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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