DRSC/TRiP Functional Genomics Resources

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Protein Alignment puf and usp25

DIOPT Version :10

Sequence 1:NP_001262923.1 Gene:puf / 42935 FlyBaseID:FBgn0039214 Length:3930 Species:Drosophila melanogaster
Sequence 2:XP_009303832.2 Gene:usp25 / 406790 ZFINID:ZDB-GENE-040426-2847 Length:1166 Species:Danio rerio


Alignment Length:1064 Identity:206/1064 - (19%)
Similarity:359/1064 - (33%) Gaps:370/1064 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1987 LAQHKSGPKQPYPWDYW-----PRDEGRAECGYVGLTNLGATCYMASCVQHLYMMPQARAAVLRV 2046
            :|::|:..|:.:. :.|     |.:..|.|...|||.|:|.||:.::.:|.|:.:.:.:..||..
Zfish   136 IAENKASLKRTHT-EVWSDSPNPHERKRMENCPVGLKNVGNTCWFSAVIQSLFNLLEFQRLVLHY 199

  Fly  2047 PPNA--------ARKHG--PTLLELQRMFAYLLESERKSYNPRSFCRVYQMDHQPLNTGEQKDMA 2101
            .|.|        .::|.  |.:.||:.:|:.|:.|:||..:|.....:.: |....:..:|:|::
Zfish   200 SPPARMQDLPRNQKEHRNLPFMQELRHLFSLLVGSKRKYVDPSGAVEILK-DAFKSSESQQQDVS 263

  Fly  2102 EFFIDLVSKLEDM------------TPDLKHLVKRLFCGS-LSNNVVSLDCGHVSRTAEDFYTVR 2153
            ||...|:..|||.            .|  |:.:..||.|. |:..|:.   |......|.|....
Zfish   264 EFTHKLLDWLEDAFQIKAEEDREGEKP--KNPMVELFYGRFLAVGVLE---GKKFENTEMFGQYP 323

  Fly  2154 CQVADMRNLQESLDEVTVKDTLEGDNMYTCSQCGKKVRAEKRACFKKLPQILCFNTMRYTFNMVT 2218
            .||...::|.|.|:...::..:|  ::::.....|   :.:...|.:||.:|.|...|:.||...
Zfish   324 LQVNGFKDLHECLEAAMIEGEIE--SLHSAENSAK---SGQEHWFTELPPVLTFELSRFEFNQAL 383

  Fly  2219 MLKEKVNTHFSFPLRLNMCHYVEKTLMPQQYKEERERRQKEK----------------------- 2260
            ...||::....||..|.|..|:::.....:.|.|..||.||.                       
Zfish   384 GRPEKIHNKLEFPSMLYMDRYMDRNREITRIKREEIRRLKEHLTVLQQRLERYLSYGSGPKRFPL 448

  Fly  2261 --------------------------------------------------EGADGSGDG------ 2269
                                                              ..|:|||.|      
Zfish   449 ADVLQYAMEFASSKPVCTSPVEDIDTTAPPGGTIAQLPPPASAGEQPDACVSAEGSGSGLQASQQ 513

  Fly  2270 -------------------------------------------------NDNEKAEATLD---DD 2282
                                                             ||....:|::.   ..
Zfish   514 QQQRVSIHKPFTQSRVPPDLPMHPAPRHITEEELRVLESCLHRWRSEVENDTRDLQASISRIHRT 578

  Fly  2283 IEECYE--------YELVGVTVHTGTADGGHYYSFIKERTKTSYHTHERWFLFNDAEVKPFDPSQ 2339
            ||..|.        |.|..|.||.|.|:.|||:::|.:|     | |:||..:||..|......:
Zfish   579 IELMYSDKSMMQVPYRLHAVLVHEGQANAGHYWAYIYDR-----H-HQRWMKYNDIAVTKSSWEE 637

  Fly  2340 IAAECFGGEMTSKTYDSVTEKYLDFSFEKTNSAYMLFYERRLPEHLQRRHSELLVTPTPSPTVEE 2404
            :..:.|||                   .:..|||.|.|                 .....|.:.:
Zfish   638 LVRDSFGG-------------------YRNASAYCLMY-----------------IDDKKPFLIQ 666

  Fly  2405 KSEAEEPTKMETSSSEIKADVDVEVEVEEK-----------------DKEKPA------------ 2440
            :...:|..:|.:...::..|:.|.||.:.|                 .:||.|            
Zfish   667 EEFDKETGQMLSGLDKLPPDLKVFVEADNKLFEREMEEWDALQARKLQQEKLALAAAAAAAAAAS 731

  Fly  2441 -QTDTESKETPAKEEIADDKSKQDEPEEKKIEKQSREGEEKSETDEKPTEMTTVSTE-EEKQPTA 2503
             .....|.|..:.:..|...:.|.:||  .:|:||..|:.|...::....::..:.| :||.|.|
Zfish   732 VAVQPMSTEPCSPDNTAPSAAPQHDPE--YMEQQSPSGDSKHLQEDTERAISKAAAEHDEKSPEA 794

  Fly  2504 NCDNHQQNNNSNSKASNDQQPS------------------TSKAAQKLQLFRPLLNKE---LEDW 2547
            .. |..|:::.:||.::|..|.                  ...|...:..| .:.:||   .::.
Zfish   795 LL-NTSQSSHPDSKLTSDPCPPPDPEQDDPTCPPPGPQRVVEVAIPNVGTF-VIQSKEGGYDDEA 857

  Fly  2548 IWQDNRQFL-----QDRNIFEHTYFNFMWQICGHIPQSL------ISETDVTCMAAK-------L 2594
            :...|.|.:     :.|::::.         ||  |::.      :..|.:..:|.:       .
Zfish   858 MMTPNMQGIIMAIGKSRSVYDK---------CG--PEAAFFKAMKVEYTRLLRLAQEDTPPERDY 911

  Fly  2595 SVSFFIETFIHAKEKPTMVPWVE-LLTKQFN----ASQEACEWFLS--------------HMSQE 2640
            .:...|..||| .|.|..:  || .|..||.    ...|.|:..:.              :|.:.
Zfish   912 RLQHVIVFFIH-NEAPKKI--VERTLLMQFADRNLGFDERCKSIMKVARAKLELIKPDEVNMEEY 973

  Fly  2641 PYW----------PVQVLIQCPNQMVRQMFQRLVIHVIQQLRASHAHLYLEVETDEDDKELIGQA 2695
            ..|          .|.:||.. ...:::.|...::::|      :|:.|        :|||:.:.
Zfish   974 EMWHQDYRIFRETSVFLLIGL-ELFMKKSFVEALMYLI------YAYQY--------NKELLAKG 1023

  Fly  2696 SCVTRFIGSLISLLEHGARANLRHLSEYFGLLCEFSRMGDEEAMYLLRIGVLKSLVDFYLGHKQT 2760
            .    :.|....|:.|..|..|..|:||...|.|..    |||.....:.::..||...|.....
Zfish  1024 P----YRGHDEELIAHYRRECLLKLNEYAAALFETG----EEAKVNTGLSIMNDLVVPCLPLLLV 1080

  Fly  2761 DSIDISSDNEDNSSEEALSVEKMR 2784
            |.::         .::.::||.||
Zfish  1081 DEME---------EKDMVAVEDMR 1095

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pufNP_001262923.1 peptidase_C19C 2013..2382 CDD:239124 108/530 (20%)
DUF3517 2648..>2884 CDD:463438 30/137 (22%)
MDN1 <3661..>3887 CDD:444083
usp25XP_009303832.2 None
Blue background indicates that the domain is not in the aligned region.

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