Protein Alignment puf and usp40

DIOPT Version :9

• Sequence 1: NP_001262923.1
• Gene: puf / 42935
• FlyBaseID: FBgn0039214
• Length: 3930
• Species: Drosophila melanogaster
• Sequence 2: XP_001921353.3
• Gene: usp40 / 402834
• ZFINID: ZDB-GENE-060518-5
• Length: 1263
• Species: Danio rerio
• Alignment Length: 569
• Identity: 127/569 - (22%)
• Similarity: 199/569 - (34%)
• Gaps: 207/569 - (36%)

  Fly  2009 RAECGYVGLTNLGATCYMASCVQHLYMMPQARAAVLRVPPN----AARKHGPTL------LELQR 2063
            |.:....|:.|.|.|||:.|.:|.|...|:.|..:..:.|:    .|.|..|..      |||||
Zfish    32 RGKIKLCGIKNQGGTCYLNSLIQTLLFTPEFREELFHLGPDELGCLADKDKPEAKVRVIPLELQR 96

  Fly  2064 MFAYLLESERKSYNPRSFCRVYQMDHQPLNTGE--------------QKDMAEFFIDLVSKLEDM 2114
            :|::||                .:|.|..:|.:              |:|:.|....|.|.||..
Zfish    97 LFSHLL----------------LVDEQTASTTDLTDSFGWTNNEEMGQQDVQELNRILFSALESS 145

  Fly  2115 TPDL--KHLVKRLFCGSLSNNVVSLDCGHVSRTAEDFYTVRCQVADMRNLQESLDEVTVKDTL-E 2176
            ..|.  ..|:.||:.|:|.|.:...:|.::|...|||..:...|:.:..|:|:|..:.|::.: |
Zfish   146 LVDTSGSSLIHRLYHGTLVNQITCKECSYISERQEDFLDLTVSVSGVSGLEEALWNMFVEEEMFE 210

  Fly  2177 GDNMYTCSQCGKKVRAEKRACFKKLPQILCFNTMRYTFNMVTMLKEKVNTHFSFPLRLNMCHYVE 2241
            |:|:|.||.||:.|||.|.|..:|||..|..:.:|:.|:.....:.|....:.|||..|:..:.|
Zfish   211 GNNLYRCSGCGQLVRAAKSAKLRKLPPFLTISLLRFNFDFTKCERYKETGSYVFPLTFNLRPFCE 275

  Fly  2242 KTLMPQQYKEERERRQKEKEGADGSGDGNDNEKAEATLDDDIEECYEYELVGVTVHTGTADGGHY 2306
            ::..|                        |:|             |.|||..|.:|.|...||||
Zfish   276 QSNWP------------------------DSE-------------YSYELFSVIIHKGGCYGGHY 303

  Fly  2307 YSFIKE------------------RTKTSYH---THER--------------------------- 2323
            :.:||:                  :.||...   |.||
Zfish   304 HVYIKDIDQLGHWEAPEEEKNVKMKVKTQKQENKTEERKTESENSLETEDPLSVLTGILAQEESK 368

  Fly  2324 ------------------W-------------FLFNDAEV------------------------- 2332
                              |             ||.:..||
Zfish   369 CVLVDQLGQKLLNKIGTPWSKKYKKQYGSISKFLQSHPEVFMLISNGTRVALKAGVPTEASPPEL 433

  Fly  2333 ----------KPFDPSQIAA-------ECFGGEMTSKTYDSVTEKYLDFSFEKTNSAYMLFYE-- 2378
                      :..:|....|       :|...::...|..::|.|.::..|:...|||||||.
Zfish   434 VNSTAADSCPENTEPETATAGENEDPDQCHWFDLNDSTVTAITVKDIEKQFQGKESAYMLFYRKT 498

  Fly  2379 --RRLPEHLQRRHSELLVTPTPSPTVEEKSEAEEPTKMETSSSEIKADV 2425
              :|.||.:  .:....|.|.....|||::...:..:.|..:|....:|
Zfish   499 TLKRPPEAI--GNPAYKVPPHLLEMVEEENAGLQHKRAEFDASSNSIEV 545

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
puf	NP_001262923.1	peptidase_C19C	2013..2382	CDD:239124	116/520 (22%)
		UCH	2014..2377	CDD:278850	113/510 (22%)
		DUF3517	2723..>2877	CDD:288853
usp40	XP_001921353.3	Peptidase_C19	37..316	CDD:271592	91/331 (27%)
		UCH_1	39..308	CDD:290159	89/321 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5077
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810