DRSC/TRiP Functional Genomics Resources

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Protein Alignment puf and ubp15

DIOPT Version :10

Sequence 1:NP_001262923.1 Gene:puf / 42935 FlyBaseID:FBgn0039214 Length:3930 Species:Drosophila melanogaster
Sequence 2:NP_595341.1 Gene:ubp15 / 2541131 PomBaseID:SPBC713.02C Length:1129 Species:Schizosaccharomyces pombe


Alignment Length:866 Identity:183/866 - (21%)
Similarity:299/866 - (34%) Gaps:251/866 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1849 YGPAC-----RDY-FWLLARLVDTLSPEMVAEEHIDIEMLCESISQSI----------LTREYYE 1897
            |.|.|     |.| ..|.|....|:.||:|.:|...   .|...:.|:          :...::.
pombe   101 YLPQCKVEAIRKYEAELAAGKTPTIDPEIVNDETYS---CCAQFALSLSNVQDPTVMQINTSHHR 162

  Fly  1898 LRHGYQDDGLVGLLNLMSNLIKYDTTFKYTPKALSFIEQLIGFLFDMPSPADRQKPKCKSASSRA 1962
            .|...:|.|....::|....:.       ||              :.|.|.......|.|.:.| 
pombe   163 FRSEVKDWGFTRFVDLRKIAVP-------TP--------------EFPVPFLENDEICISVTVR- 205

  Fly  1963 SAYDLLVELCRGCATNYAYLHGRLLAQHKSGPKQPYPWDYWPRDEGRAECGYVGLTNLGATCYMA 2027
                                    :.|..:|    ..|..:.....:.|.|||||.|.||||||.
pombe   206 ------------------------VLQDPTG----VLWHSFVNYNSKKETGYVGLKNQGATCYMN 242

  Fly  2028 SCVQHLYMMPQARAAVLRVPPNAARKHGPTLLELQRMFAYLLESERKSYNPRSFCRVYQMDHQPL 2092
            |.:|.|:.....|..|.::|.:...........|||:| |.||.:|:..:.....|.:..:  ..
pombe   243 SLLQSLFFTNIFRKTVYKIPTDNDDSRDSVAYALQRVF-YNLEKQREPVSTTELTRSFGWN--SF 304

  Fly  2093 NTGEQKDMAEFFIDLVSKLEDMT--PDLKHLVKRLFCGSLSNNVVSLDCGHVSRTAEDFYTVRCQ 2155
            ::..|.|:.||...|...||...  .::::.:..:|.|.:.:.|..:|..:.|...|||:.::..
pombe   305 DSFMQHDIQEFNRVLQDNLEKKMKGTEVENALNDIFVGKMKSYVKCIDVNYESSRVEDFWDIQLN 369

  Fly  2156 VADMRNLQESLDEVTVKDTLEGDNMYTCSQCGKKVRAEKRACFKKLPQILCFNTMRYTFNMVTML 2220
            |..|..|::|..:....:||.|||.|.....|.: .|.|...|:.||.:|.....|:.::|:..:
pombe   370 VKGMDTLEDSFRDAIQVETLTGDNKYYAEGHGLQ-DAHKGIIFESLPNVLQLQLKRFDYDMLRDM 433

  Fly  2221 KEKVNTHFSFPLRLNMCHYVEKTLMPQQYKEERERRQKEKEGADGSGDGNDNEKAEATLDDDIEE 2285
            ..|:|....|||.:::..|:.:|                   ||.|                  |
pombe   434 MVKINDRHEFPLEIDLEPYLSET-------------------ADKS------------------E 461

  Fly  2286 CYEYELVGVTVHTGTADGGHYYSFIKERTKTSYHTHERWFLFNDAEVKPFDPSQIAAECFGGEMT 2350
            .:.|.|.||.||.|...|||||:.||....::      ||.|:|..|......::..:.:|||..
pombe   462 SHVYVLHGVLVHGGDLHGGHYYALIKPEKDSN------WFKFDDDRVTRATIKEVLEDNYGGEPA 520

  Fly  2351 SKTYDSVTEKYLDFSFEKTNSAYMLFYERRLPEHLQRRHSELLVTPTPSPTVEEKSEAEEPTKME 2415
            .:     .:.|....|::..:||||.|.|:      .|...:|                .|...|
pombe   521 GR-----AKGYNGNPFKRFMNAYMLVYFRK------SRLDHIL----------------SPVTAE 558

  Fly  2416 TSSSEIKADVDVEVEVEEKDKEKPAQTDTESKETPAKEEIADDKSKQDEPEEKKIEKQSR----E 2476
            .....::..:|.|..|.|:                          |..|.||::|.::.|    :
pombe   559 DVPFHVRNTLDEEHRVVER--------------------------KLLEREEQQIYRRVRVLTTD 597

  Fly  2477 GEEK---------SETDEKPTEMTTVSTEEEKQPTANCDNHQQNNNSNSKASNDQQPSTSKAAQK 2532
            |.:|         |.:|:.|..:||     :.:..||..:.|::                     
pombe   598 GFKKYHGFDMTDFSASDDDPVLITT-----KIKRNANIWDLQKH--------------------- 636

  Fly  2533 LQLFRPLLNKE---LEDWIW--QDNRQFLQDRNIFEHTYFNFMWQICG-HIPQSLISETDVTCMA 2591
               ...|||::   :..|:.  :.||....|..:.:.|.  .:.|||. ||.:.         |.
pombe   637 ---LAGLLNRDTSGIRIWLMTNRQNRTVRVDLPLDKKTI--LVDQICDMHIRKD---------MD 687

  Fly  2592 AKLSVSFFIE-----------------TFIHAK----EKPTMVPWVELLTKQFNASQEACEWFLS 2635
            .::.|.|..|                 |:|..|    |...:....:|...:.:......||...
pombe   688 MRVYVEFLSEHNQLLADFGATDDNDFDTYIFLKIFDYETQQISGLADLHVSKNSPISSLSEWIRE 752

  Fly  2636 HMSQEPYWPVQVLIQCPNQMV 2656
            |:......|:....:....||
pombe   753 HLKWSSDVPITYYEEIKTGMV 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pufNP_001262923.1 peptidase_C19C 2013..2382 CDD:239124 102/370 (28%)
DUF3517 2648..>2884 CDD:463438 2/9 (22%)
MDN1 <3661..>3887 CDD:444083
ubp15NP_595341.1 COG5077 13..1129 CDD:227409 183/866 (21%)
Blue background indicates that the domain is not in the aligned region.

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