DRSC/TRiP Functional Genomics Resources

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Protein Alignment puf and Usp7

DIOPT Version :9

Sequence 1:NP_001262923.1 Gene:puf / 42935 FlyBaseID:FBgn0039214 Length:3930 Species:Drosophila melanogaster
Sequence 2:XP_006522201.1 Gene:Usp7 / 252870 MGIID:2182061 Length:1143 Species:Mus musculus


Alignment Length:1044 Identity:212/1044 - (20%)
Similarity:359/1044 - (34%) Gaps:306/1044 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  2000 WDYWPRDEGRAECGYVGLTNLGATCYMASCVQHLYMMPQARAAVLRVPPNAARKHGPTLLELQRM 2064
            ||      .:...|||||.|.||||||.|.:|.|:...|.|.||..:|...........|.|||:
Mouse   246 WD------SKKHTGYVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSKSVPLALQRV 304

  Fly  2065 FAYLLESERKSYNPRSFCRVYQMDHQPLNTGEQKDMAEFFIDLVSKLEDMTPD--LKHLVKRLFC 2127
            | |.|:...|....:...:.:  ..:.|::..|.|:.|....|:..:|:....  ::..:.:||.
Mouse   305 F-YELQHSDKPVGTKKLTKSF--GWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFR 366

  Fly  2128 GSLSNNVVSLDCGHVSRTAEDFYTVRCQVADMRNLQESLDEVTVKDTLEGDNMYTCSQCGKKVRA 2192
            |.:.:.:...|..:.|...||:|.::..:...:|:.||..:....:.|:|||.|...:.|.: .|
Mouse   367 GKMVSYIQCKDVDYRSDRREDYYDIQLSIKGKKNIFESFVDYVAVEQLDGDNKYDAGEHGLQ-EA 430

  Fly  2193 EKRACFKKLPQILCFNTMRYTFNMVTMLKEKVNTHFSFPLRLNMCHYVEKTLMPQQYKEERERRQ 2257
            ||...|..||.:|....||:.::..|....|:|..|.||.:|.:..:::||              
Mouse   431 EKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFEFPEQLPLDEFLQKT-------------- 481

  Fly  2258 KEKEGADGSGDGNDNEKAEATLDDDIEECYEYELVGVTVHTGTADGGHYYSFIKERTKTSYHTHE 2322
                                    |.::...|.|..|.||:|...||||..::..:      ...
Mouse   482 ------------------------DPKDPANYILHAVLVHSGDNHGGHYVVYLNPK------GDG 516

  Fly  2323 RWFLFNDAEVKPFDPSQIAAECFGGEMTSKTYDSVTEKYLDFSFEKTNSAYMLFYERRLPEHLQR 2387
            :|..|:|         .:.:.|...|.....|....:   |.|.....:||||.|.|      :.
Mouse   517 KWCKFDD---------DVVSRCTKEEAIEHNYGGHDD---DLSVRHCTNAYMLVYIR------ES 563

  Fly  2388 RHSELLVTPT----PSPTVEEKSEAEEPTKMETSSSEIKADVDVEVEVEEKDKEKPAQTDTESKE 2448
            :.||:|...|    |...||   ..:|..::|....:.:.:..:.::|                :
Mouse   564 KLSEVLQAVTDHDIPQQLVE---RLQEEKRIEAQKRKERQEAHLYMQV----------------Q 609

  Fly  2449 TPAKEEIADDKSKQDEPEEK------KIEKQSREGE---EKSETDEKPTEMTTV-----STEEEK 2499
            ..|:::....:......|||      |:.|.|...|   ..|:|...|.:...:     .:...|
Mouse   610 IVAEDQFCGHQGNDMYDEEKVRYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTK 674

  Fly  2500 QPTANCDNHQQNNNSNSKASNDQQPST--------SKAAQKLQLFRPLLNKELEDWIWQDNRQFL 2556
            :| |..||....|.:..:.|:::.|.|        ..||....|  |..:|:             
Mouse   675 RP-AMLDNEADGNKTMIELSDNENPWTIFLETVDPELAASGATL--PKFDKD------------- 723

  Fly  2557 QDRNIFEHTY------FNFMWQICGHIPQSLISETDVTCMAAKL------SVSFFIET--FIHAK 2607
            .|..:|...|      .|:    ||||      .|.::|....|      ...|..:|  .::.:
Mouse   724 HDVMLFLKMYDPKTRSLNY----CGHI------YTPISCKIRDLLPVMCDRAGFIQDTSLILYEE 778

  Fly  2608 EKPTMVPWV------------ELLTKQFNASQE------------ACEWFLSHMSQEPYWPVQVL 2648
            .||.:...:            ||:.......|:            |.|:|     ::.|..|.|:
Mouse   779 VKPNLTERIQDYDVSLDKALDELMDGDIIVFQKDDPENDNSELPTAKEYF-----RDLYHRVDVI 838

  Fly  2649 IQC----PN---------------QMVRQMFQRLVIHVIQQLRASHAHLYLEVETDEDDKELIGQ 2694
            . |    ||               |:.:.:.|||          :...:.|:....:..::..|.
Mouse   839 F-CDKTIPNDPGFVVTLSNRMNYFQVAKTVAQRL----------NTDPMLLQFFKSQGYRDGPGN 892

  Fly  2695 ASCVTRFIGSLISLLEHGARANLRHLSEYFGLLCEFSRMGDEEAMYLLRIGVLKSLVDFYLGHKQ 2759
            .             |.|.....||.|.::|       :....:.:|..:   ||..:..:...:.
Mouse   893 P-------------LRHNYEGTLRDLLQFF-------KPRQPKKLYYQQ---LKMKITDFENRRS 934

  Fly  2760 TDSIDISSDNEDNSSEEALSVEKMRPASLDKMIALCASLVERSRGADFRLRLSPKDFSAIAGGKG 2824
            ...|.::|    ...||.:::...:...:..::..|...||....|..||||             
Mouse   935 FKCIWLNS----QFREEEITLYPDKHGCVRDLLEECKKAVELGDKASGRLRL------------- 982

  Fly  2825 FPFLYQQIKDGINPHQTKHLIHALC-------RWDERLATQIIGMLFASVTKHTEL---CAPFFK 2879
            ...:..:|   |..||...|:..|.       |.:|....|:      .:.|..|:   .|.|.|
Mouse   983 LEIVSYKI---IGVHQEDELLECLSPATSRTFRIEEIPLDQV------DIDKENEMLITVAHFHK 1038

  Fly  2880 LLTLLTETQGGPVGLPCFTQL--------ILPRMWDAAEYCPQSVLDWLSLQATKNKIA------ 2930
            .:.       |..|:|...::        ::.|:        ||:||....:..|.|.|      
Mouse  1039 EVF-------GTFGIPFLLRIHQGEHFREVMKRI--------QSLLDIQEKEFEKFKFAIVMMGR 1088

  Fly  2931 HAWI 2934
            |.:|
Mouse  1089 HQYI 1092

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pufNP_001262923.1 peptidase_C19C 2013..2382 CDD:239124 94/370 (25%)
UCH 2014..2377 CDD:278850 91/364 (25%)
DUF3517 2723..>2877 CDD:288853 28/163 (17%)
Usp7XP_006522201.1 COG5077 96..1141 CDD:227409 212/1044 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5077
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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