DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment atl and AT5G46070

DIOPT Version :9

Sequence 1:	NP_001287506.1	Gene:	atl / 42934	FlyBaseID:	FBgn0039213	Length:	541	Species:	Drosophila melanogaster
Sequence 2:	NP_199419.2	Gene:	AT5G46070 / 834648	AraportID:	AT5G46070	Length:	1082	Species:	Arabidopsis thaliana

Alignment Length:	523	Identity:	116/523 - (22%)
Similarity:	203/523 - (38%)	Gaps:	96/523 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly     6 VQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSKYVHHD 70
            ::::...|:..|.::.:|::.:.:   ||:. :.||||.|..|:||||:|:..|
plant    42 IRLVYCDEKGKFRMDPEAVATLQL---VKEP-IGVVSVCGRARQGKSFILNQLL----------- 91

  Fly    71 ATDWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQG--AFDSQSTVR 133
                  |.|:   ||......:..|.|:.:||........:|.:..::|||::|  |:|...|.
plant    92 ------GRSN---GFQVASTHKPCTKGLWLWSSPIKRTALDGTEYNLLLLDSEGIDAYDQTGTY- 146

  Fly   134 DCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEY----------GRLALADTGK-KPFQRL 187
             ...:|:|:.:|||:.:||....|.|..|..|.|.|:.          |..:.::.|: .|.  .
plant   147 -STQIFSLAVLLSSMFVYNQMGGIDEASLDRLSLVTQMTKHIRVKASGGTSSRSELGQFSPI--F 208

  Fly   188 QFLVRDWSFPYEAEYGALGGDKILKRRLEVSDKQHPEL---------------QSLRRHISSCFT 237
            .:|:||:..            .:::...::|.:.:.|:               ..:|..|.:.|.
plant   209 VWLLRDFYL------------DLVEDNRKISPRDYLEIALRPVQGSGGDIGAKNEIRDSIRALFP 261

  Fly   238 EVACFLMPHPGLNVATNPKFDG-RLQDITPEFKSSLRSLVPMLLAPDNLVYKEISGQRVRARDLI 301
            :..||.:..|..|.....:.|. .|:.:.|||.:.|.:....:.  :....|::.|..:....|:
plant   262 DRECFTLVRPLNNEKDLQRLDQISLEKLRPEFGAGLDAFTKFVF--EKTRPKQLGGTVMTGPILV 324

  Fly   302 QYFQSYMNIYKGNELPEPKSMLVATAEANHLTAVAAAKELYGQLMEEVCGGTRPYLSTAHLQTEH 366
            ...|||::......:|...|...:..|.....|..:..|.|....::   ...|  ....|:.||
plant   325 GITQSYLDALNNGAVPTITSSWQSVEETECRRAYDSGVEAYMAAFDQ---SKAP--EEGALREEH 384

  Fly   367 LRVKDKALFQFAAKRKMGGEEFTEKFRKQLEDDLEEVFTNYQAHNESKNIFKAARTPAVYFACAV 431
            .....|||..|.: ..:|.....:||...|..||::.|.:|:     ||.|..|.     ..|..
plant   385 EEAVRKALAIFNS-NAVGNGSARKKFEDLLHKDLKKKFEDYK-----KNAFMEAD-----LRCTS 438

  Fly   432 IMYILSGIFGLVGLYTFANFCNLVMGVALLTLALWAYIRYSGELSDFG-GKLDDFATLLWEKFMR 495
            .:..:..........:.||..|:   |.:|...|..|     |.|..| ||....:..|.:....
plant   439 TIQRMEKQLRAACHASNANMDNV---VKVLEARLAEY-----EASCHGPGKWQKLSVFLQQSLEG 495

  Fly   496 PIY 498
            |||
plant   496 PIY 498

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
atl	NP_001287506.1	GBP	14..289	CDD:280433	66/303 (22%)
atl	NP_001287506.1	MSC	<316..>471	CDD:286487	34/154 (22%)
AT5G46070	NP_199419.2	GBP	64..307	CDD:206650	64/284 (23%)
		GBP_C	314..617	CDD:397124	48/209 (23%)
		Smc	<605..956	CDD:224117
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	63	1.000	Domainoid score	I3722
eggNOG	1	0.900	-	-		E1_KOG2037
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1027269at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.820