DRSC/TRiP Functional Genomics Resources

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Protein Alignment atl and AT2G38840

DIOPT Version :9

Sequence 1:NP_001287506.1 Gene:atl / 42934 FlyBaseID:FBgn0039213 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_181418.3 Gene:AT2G38840 / 818468 AraportID:AT2G38840 Length:602 Species:Arabidopsis thaliana


Alignment Length:581 Identity:134/581 - (23%)
Similarity:229/581 - (39%) Gaps:159/581 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AVQVINASEEHT-FVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSKYVH 68
            |..::..:..|| ..|:.:.| |.:.|....   :..|:|.|.:|.||||||:..|  ..|.|  
plant    30 AFPIVEPAPGHTKLQLSREGL-EAISRITTP---ISAVAVIGPYRSGKSFLLNQLL--SLSCY-- 86

  Fly    69 HDATDWLGGESDPLEGFSWRGGSERD--TTGILMWS-----DIFLHDYPNGDKIAIILLDTQGAF 126
                          |||.  .|..||  |.||.:|.     :|      :|.|.::|.|||:| |
plant    87 --------------EGFG--VGHMRDTKTKGIWVWGTPLELEI------DGVKTSVIYLDTEG-F 128

  Fly   127 DS--QSTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTE-----YGRLALADTGKKPF 184
            :|  :|.|.| ..:|||:|::|||.||||.:.|:|.|:..|....|     |||:...|...:|.
plant   129 ESVGKSNVYD-DRIFALATVMSSVLIYNLPETIREADISRLSFAVELAEEFYGRVKGEDVAFEPS 192

  Fly   185 QRLQFLVRDWSFPYEAEYGALGGDKILKRRL---------EVSDKQHPELQSLRRHISSCFTEVA 240
            :.|..:.||:          |.| |.:|:.:         |..:|...::..:|..::.......
plant   193 KLLWLIQRDF----------LQG-KSVKQMVDEALRHVPNEDGNKNIDQVNQIRDSLAIMGDNST 246

  Fly   241 CFLMPHPGLNVATNPKFDGRLQDITPEF---KSSLRSLVPMLLAPDNLVYKEISGQRVRARDLIQ 302
            .|.:|.|  ::......|.:.:|:...:   :..|:.||..::.|     |.:.|:.:..::.|.
plant   247 AFSLPQP--HLMRTKLCDLKDEDLDSTYVARRDQLKKLVASIIRP-----KIVQGKTLNGKEFIS 304

  Fly   303 YFQSYMNIYKGNELPEPKSMLVATAEANHLTAVAAAKELYGQLMEEVCGGTRPYLSTAHLQTEHL 367
            :.:..::.....|:|...|::    |..:...|....:||.:.|..|    |..:|...||:.|.
plant   305 FLEQILDALNKGEIPSTGSLV----EVFNKDIVERCVKLYNEKMVRV----RLPMSEESLQSAHE 361

  Fly   368 RVKDKALFQFAAKRKMGGEEFTEKFRKQLEDDLEEVFTNYQAHNESKNIFKAARTPAVYFACAVI 432
            ...::|:..|.|:.  .|.:..:|...||::.::||:.|:...||.::   :....|:|.:|...
plant   362 MAHNEAIKAFDAQH--FGRQHAKKSVDQLDEQMQEVYKNFVLANEYQS---SKLCEALYTSCEDD 421

  Fly   433 MYILSGI-------FGLVGLY---TFANFC----------------------------------- 452
            |..|..:       |....:|   ||...|                                   
plant   422 MDHLQALRLPSMAKFNAGFVYCNKTFEQQCVGPSKQNYEQRLTKMMGKSRSLFIKEYNNRLFNWL 486

  Fly   453 ---NLVMGVA--------LLTLALWAYIRYSGELSDFGGKLDDFATLLWEK---FMRPIYH 499
               :|||.|.        ||.:|.|....:          |:.:..:.|..   :..|::|
plant   487 VGFSLVMVVVGRFIIKFILLEMAAWILFIF----------LETYTRMFWTAEALYYNPVWH 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atlNP_001287506.1 GBP 14..289 CDD:280433 82/301 (27%)
MSC <316..>471 CDD:286487 43/210 (20%)
AT2G38840NP_181418.3 GBP 54..285 CDD:206650 76/274 (28%)
GBP_C 311..>423 CDD:303769 29/124 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 63 1.000 Domainoid score I3722
eggNOG 1 0.900 - - E1_KOG2037
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2263
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1027269at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto3477
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.870

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