DRSC/TRiP Functional Genomics Resources

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Protein Alignment atl and Gbp8

DIOPT Version :9

Sequence 1:NP_001287506.1 Gene:atl / 42934 FlyBaseID:FBgn0039213 Length:541 Species:Drosophila melanogaster
Sequence 2:XP_011247895.1 Gene:Gbp8 / 76074 MGIID:1923324 Length:608 Species:Mus musculus


Alignment Length:437 Identity:99/437 - (22%)
Similarity:170/437 - (38%) Gaps:81/437 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSKYVHHDAT 72
            ::....||..| |.:|: |:|   |...:.|.||::.|.:|.|||:|:                 
Mouse    11 LVENHNEHLSV-NHEAI-EIL---EKISQPVVVVAIVGLYRTGKSYLM----------------- 53

  Fly    73 DWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGAFD-SQSTVRDCA 136
            :.|.|::   .||......:..|.||.||    ...:|...:..::||||:|..| .:...::..
Mouse    54 NRLAGQN---HGFPLGSTVQSQTKGIWMW----CMPHPTKPEHTLVLLDTEGLGDVEKGDPKNDL 111

  Fly   137 TVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKP------------FQRLQF 189
            .:||||.:|||..|||....|..|.|:.|...||...|..|.:...|            |....:
Mouse   112 WIFALSVLLSSTFIYNSMNTISHDSLEKLHYVTELTELIRAKSSPNPDGIKNSTEFVSFFPDFVW 176

  Fly   190 LVRDWSFPYEAEYGALGGDKILKRRLEVSDKQHPELQSLR--RHISSCF--TEVACFLMPHP--- 247
            .|||:....:.....:..|:.|:..|::....:|.:|:..  |....||  ...:||:...|   
Mouse   177 TVRDFMLELKLNGEDITSDEYLENALKLIPGYNPRVQASNSARECIRCFFPNRKSCFVFDRPTHD 241

  Fly   248 -----GLNVATNPKFDGRLQDITPEFKSSLRSLVPMLLAPDNLVYKEI----SGQRVRARDLIQY 303
                 .|...:..:.|.:.::.|..|.|.:.:            |.:|    .|.:|....|...
Mouse   242 RELLQKLETISEDQLDLKFREETNAFVSYIFN------------YAKIKTLKEGIKVTGNGLGIL 294

  Fly   304 FQSYMNIYKGNELPEPKSMLVATAEANHLTAVAAAKELYGQLMEEVCGGTRPYLSTAHLQ---TE 365
            ..:|::......:|.....:...|:..:..||..|.:.|.:.|.:     |..|.|..||   ..
Mouse   295 VTTYVDAINSGAVPCVDDAVTTLAQRENSVAVQRAADHYSEQMVQ-----RLSLPTDTLQELLDV 354

  Fly   366 HLRVKDKALFQFAAKRKMGGEEFTEKFRKQLEDDLEEVFTNYQAHNE 412
            |...:.:|:..|   .:...::..::|.|:|.:.:.|....:...||
Mouse   355 HAACEKEAMAVF---MEHSFKDENQQFLKKLVELIGEAKVLFLLKNE 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atlNP_001287506.1 GBP 14..289 CDD:280433 73/299 (24%)
MSC <316..>471 CDD:286487 21/100 (21%)
Gbp8XP_011247895.1 GBP 16..280 CDD:308078 74/304 (24%)
GBP_C 282..576 CDD:308475 25/125 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167832128
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2037
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1027269at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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