DRSC/TRiP Functional Genomics Resources

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Protein Alignment atl and Gbp3

DIOPT Version :10

Sequence 1:NP_651274.1 Gene:atl / 42934 FlyBaseID:FBgn0039213 Length:541 Species:Drosophila melanogaster
Sequence 2:XP_063138992.1 Gene:Gbp3 / 685116 RGDID:1597766 Length:790 Species:Rattus norvegicus


Alignment Length:440 Identity:98/440 - (22%)
Similarity:158/440 - (35%) Gaps:99/440 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VCVVSVAGAFRKGKSFLLDFFLRYMYSKYVHHDATDWLGGESDPLEGFSWRGGSERDTTGILMWS 102
            |.|::..|.:|.|||:|:                 :.|.|..   .|||.....:..||||.|| 
  Rat    38 VVVIATVGLYRTGKSYLM-----------------NKLAGRK---TGFSLGSTVQSHTTGIWMW- 81

  Fly   103 DIFLHDYPNGDKIAIILLDTQGAFDSQ--STVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHL 165
               ...:|......::||||:|..|.:  ....|| .:|||:.:|||..:||....|.:..:..|
  Rat    82 ---CVPHPRKADHTLVLLDTEGLGDVEKGDNQNDC-WIFALAILLSSTFVYNSMGAINQQAMDQL 142

  Fly   166 QLFTEYGRLALAD---TGKKP--------------FQRLQFLVRDWSFPYEAEYGALGGDKILKR 213
            |..||     |.|   |...|              |....:.:||.:...|.:...|..|:.|..
  Rat   143 QYVTE-----LTDRIRTTSSPHSNGVEASAEFVSFFPDFVWTLRDVTVKLEKDGKMLTADEYLDN 202

  Fly   214 RLEVSDKQHPELQSL---RRHISSCFTEVACFLMPHP-------GLNVATNPKFDGRLQDITPEF 268
            .|:.......|.::.   |..|...|.:..||:...|       .|....:.:.|.........|
  Rat   203 SLKPKQGTSEEDRNYNLPRLCIRKFFPKKKCFVFYSPTEWKKLSELESLRDDELDSEFLQQAANF 267

  Fly   269 KSSLRSLVPMLLAPDNLVYKEISGQRVRARDLIQYFQSYMNIYKGNELPEPKSMLVATAEANHLT 333
            .|.:.|.......|..:   :::|.|:....|     :|::......||..::.::|.|:..:..
  Rat   268 CSFIFSSSKAKRLPGGI---QVNGARLEKLVL-----TYISAISSGHLPCMENAVLALAKVENSA 324

  Fly   334 AVAAAKELYGQLMEEVCGGTRPYLSTAHLQ-------TEHLRVKDKALFQFAAKRKMGGEEFTEK 391
            |:..|...|.|   ::|  .:..|.|..||       |.....||..|       :...::....
  Rat   325 AIQKAITHYDQ---QMC--QKVQLPTDTLQELLDLHRTCEREAKDIFL-------RTSFKDEDHS 377

  Fly   392 FRKQLEDDLEEVFTNYQAHNESKNIFKAARTPAVYFACAVIMYILSGIFG 441
            |:|.|...||:.:......|.:|:..:.:.             :|..|||
  Rat   378 FKKDLLAQLEKKWNGINNENMNKSSTRCSE-------------LLRDIFG 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atlNP_651274.1 GBP 14..289 CDD:460516 66/279 (24%)
Gbp3XP_063138992.1 None

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