DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atl and atl3

DIOPT Version :9

Sequence 1:NP_001287506.1 Gene:atl / 42934 FlyBaseID:FBgn0039213 Length:541 Species:Drosophila melanogaster
Sequence 2:XP_031755947.1 Gene:atl3 / 549349 XenbaseID:XB-GENE-1009682 Length:524 Species:Xenopus tropicalis


Alignment Length:496 Identity:280/496 - (56%)
Similarity:369/496 - (74%) Gaps:5/496 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGSA---VQVINA-SEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRY 61
            |..||   |||:.. .::|:|.|:|:||:.||::|.::|..|.||||||||||||||||||.|||
 Frog     4 MASSAPGPVQVVLVQKDDHSFQLDEEALASVLLQDHIRDLDVVVVSVAGAFRKGKSFLLDFMLRY 68

  Fly    62 MYSKYVHHDATDWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGAF 126
            :||:....:.: |||||.:||.||||:||||.|||||.:||::|..:.|:|.|:|::|:||||||
 Frog    69 VYSQKEGGEQS-WLGGEDEPLTGFSWKGGSEPDTTGIQIWSEVFTMNKPDGKKVAVVLMDTQGAF 132

  Fly   127 DSQSTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQRLQFLV 191
            ||||||:||||:||||||.||:|||||||||||||||.|||||||||||:.:...||||.|.|||
 Frog   133 DSQSTVKDCATIFALSTMTSSIQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFLKPFQTLMFLV 197

  Fly   192 RDWSFPYEAEYGALGGDKILKRRLEVSDKQHPELQSLRRHISSCFTEVACFLMPHPGLNVATNPK 256
            ||||||||..||..||.|.|::||:|.:.||.|:|::|:||.||||.|.|||:|||||.|||:|:
 Frog   198 RDWSFPYEYHYGTEGGMKFLEKRLKVKEHQHEEIQNVRKHIHSCFTAVNCFLLPHPGLKVATSPQ 262

  Fly   257 FDGRLQDITPEFKSSLRSLVPMLLAPDNLVYKEISGQRVRARDLIQYFQSYMNIYKGNELPEPKS 321
            |||||:||.|||...||.|:|::|:.:.|:.|||:|.:|..|.|::||::|:.||:|.:||.|||
 Frog   263 FDGRLKDIAPEFTEQLRDLIPLVLSSECLMEKEINGSKVTCRGLLEYFKAYIKIYQGEDLPHPKS 327

  Fly   322 MLVATAEANHLTAVAAAKELYGQLMEEVCGGTRPYLSTAHLQTEHLRVKDKALFQFAAKRKMGGE 386
            ||.||||||:|.|||:||:||...||:.|||.:||:|...|:..|.....:||..|...:||||.
 Frog   328 MLQATAEANNLAAVASAKDLYNNSMEKTCGGEKPYVSPDVLRERHAVCSQEALAHFDRAKKMGGT 392

  Fly   387 EFTEKFRKQLEDDLEEVFTNYQAHNESKNIFKAARTPAVYFACAVIMYILSGIFGLVGLYTFANF 451
            ||:.::|::||.|:::::|.:..||||||||.|.|||||..|....:|:.||:.|.|||...|..
 Frog   393 EFSRQYREELEKDIDDMYTAFCKHNESKNIFTAFRTPAVLLALVAALYMASGVTGFVGLGVLAQL 457

  Fly   452 CNLVMGVALLTLALWAYIRYSGELSDFGGKLDDFATLLWEK 492
            .|..:|:.|:.|..|.||:|||:..|.||.:|..|..:.|:
 Frog   458 FNCAVGLLLIALLTWGYIKYSGQYRDLGGVIDSTAEYVLEQ 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atlNP_001287506.1 GBP 14..289 CDD:280433 177/274 (65%)
MSC <316..>471 CDD:286487 75/154 (49%)
atl3XP_031755947.1 P-loop_NTPase 21..295 CDD:422963 177/274 (65%)
GBP_C 298..>418 CDD:397124 56/119 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 383 1.000 Domainoid score I820
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 613 1.000 Inparanoid score I891
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1027269at2759
OrthoFinder 1 1.000 - - FOG0001595
OrthoInspector 1 1.000 - - otm49367
Panther 1 1.100 - - LDO PTHR10751
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1147
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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