DRSC/TRiP Functional Genomics Resources

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Protein Alignment atl and atl3

DIOPT Version :10

Sequence 1:NP_651274.1 Gene:atl / 42934 FlyBaseID:FBgn0039213 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001006016.2 Gene:atl3 / 449995 ZFINID:ZDB-GENE-041010-109 Length:513 Species:Danio rerio


Alignment Length:488 Identity:271/488 - (55%)
Similarity:361/488 - (73%) Gaps:5/488 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VQVINAS-EEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSKYVHH 69
            ||::..: |:|:|.|:.:|||.:|:..||:|:.|.||||||||||||||||||.|||||.|    
Zfish     8 VQIVTVNKEKHSFDLDTEALSRILLVPEVRDKHVVVVSVAGAFRKGKSFLLDFLLRYMYRK---- 68

  Fly    70 DATDWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGAFDSQSTVRD 134
            ...||||.::|||.|||||||||.:||||.:||::|:....:|.::|::|:||||||||||||:|
Zfish    69 PGQDWLGQDNDPLTGFSWRGGSEPETTGIQLWSEVFVVRKKDGSEVAVLLMDTQGAFDSQSTVKD 133

  Fly   135 CATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQRLQFLVRDWSFPYE 199
            |||:||||||.||||||||||||||||||.|||||||||||:.:...||||.|.|||||||||||
Zfish   134 CATIFALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEFFLKPFQSLMFLVRDWSFPYE 198

  Fly   200 AEYGALGGDKILKRRLEVSDKQHPELQSLRRHISSCFTEVACFLMPHPGLNVATNPKFDGRLQDI 264
            .:||..||...|.:||:|...||.|||::|.||.||||.::|||:|||||.|||:|.|.|:|.|:
Zfish   199 YKYGFKGGSSFLDKRLQVKQSQHEELQTVREHIHSCFTSISCFLLPHPGLKVATSPAFTGQLCDV 263

  Fly   265 TPEFKSSLRSLVPMLLAPDNLVYKEISGQRVRARDLIQYFQSYMNIYKGNELPEPKSMLVATAEA 329
            .||||..||.|:|.||..|:|..|||:|.:|..|.|::||::|:.||:|..||.|||||.|||||
Zfish   264 APEFKEGLRELIPNLLKTDDLAVKEINGNKVTCRGLLEYFKAYIKIYQGEGLPHPKSMLEATAEA 328

  Fly   330 NHLTAVAAAKELYGQLMEEVCGGTRPYLSTAHLQTEHLRVKDKALFQFAAKRKMGGEEFTEKFRK 394
            |:|.|||:||:.|.:.||:||||..||::...|:.:|.....:||..|::.:||||:.|..::::
Zfish   329 NNLAAVASAKDQYYKNMEKVCGGDLPYVAPNSLEEKHRFFLQEALHLFSSTKKMGGQHFCHRYQE 393

  Fly   395 QLEDDLEEVFTNYQAHNESKNIFKAARTPAVYFACAVIMYILSGIFGLVGLYTFANFCNLVMGVA 459
            |||.:|:|::.|...||||||:|.|.|||||.|....::|:||||...:||.|.:..|:.::|:|
Zfish   394 QLEKELKEMWENLSKHNESKNVFSAFRTPAVLFVLVCLLYVLSGILFFIGLETVSFACDCIVGLA 458

  Fly   460 LLTLALWAYIRYSGELSDFGGKLDDFATLLWEK 492
            ::.:..||:|||||...:.|..:|....::.|:
Zfish   459 MIAILTWAFIRYSGHYREVGTAIDQATGVILEQ 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atlNP_651274.1 GBP 14..289 CDD:460516 176/274 (64%)
atl3NP_001006016.2 None

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