DRSC/TRiP Functional Genomics Resources

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Protein Alignment atl and Atl1

DIOPT Version :10

Sequence 1:NP_651274.1 Gene:atl / 42934 FlyBaseID:FBgn0039213 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001009831.1 Gene:Atl1 / 362750 RGDID:1359232 Length:558 Species:Rattus norvegicus


Alignment Length:511 Identity:282/511 - (55%)
Similarity:387/511 - (75%) Gaps:15/511 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSKYVHHD 70
            |||:...::|:|.|:|.||:.:|:.:.|:|:.|..||||||||||||||:||.|||||::    :
  Rat    35 VQVLIVKDDHSFELDEAALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYNQ----E 95

  Fly    71 ATDWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGAFDSQSTVRDC 135
            :.||:|..::||.||||||||||:||||.:||::||.:..:|.|:|::|:||||.||||||:||.
  Rat    96 SVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEVFLINKLDGKKVAVLLMDTQGTFDSQSTLRDS 160

  Fly   136 ATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQRLQFLVRDWSFPYEA 200
            |||||||||:||:|:||||||:||||||||||||||||||:.:|..||||.|.|||||||||||.
  Rat   161 ATVFALSTMISSIQVYNLSQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSFPYEF 225

  Fly   201 EYGALGGDKILKRRLEVSDKQHPELQSLRRHISSCFTEVACFLMPHPGLNVATNPKFDGRLQDIT 265
            .|||.||.|.|::||:||..||.|||::|:||.||||.::|||:|||||.|||||.|||:|::|.
  Rat   226 SYGADGGAKFLEKRLKVSGNQHEELQNVRKHIHSCFTNISCFLLPHPGLKVATNPNFDGKLKEID 290

  Fly   266 PEFKSSLRSLVPMLLAPDNLVYKEISGQRVRARDLIQYFQSYMNIYKGNELPEPKSMLVATAEAN 330
            .||..:|:.|:|.||:|::|..|||:|.::..|.|::||::|:.||:|.|||.|||||.||||||
  Rat   291 DEFIKNLKILIPWLLSPESLDIKEINGNKITCRGLLEYFKAYIKIYQGEELPHPKSMLQATAEAN 355

  Fly   331 HLTAVAAAKELYGQLMEEVCGGTRPYLSTAHLQTEHLRVKDKALFQFAAKRKMGGEEFTEKFRKQ 395
            :|.|||.||:.|.:.|||:|||.:|:|:...|||:||::|:.::..|...:|||||||:.::.:|
  Rat   356 NLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTKHLQLKEDSVKLFRGVKKMGGEEFSRRYLQQ 420

  Fly   396 LEDDLEEVFTNYQAHNESKNIFKAARTPAVYFACAVIMYILSGIFGLVGLYTFANFCNLVMGVAL 460
            ||.:::|::..|..||:|||||.||||||..|....|.|:::|:.|.:||...|:.||::||:.|
  Rat   421 LESEIDELYIQYIKHNDSKNIFHAARTPATLFVVIFITYVIAGVTGFIGLDIIASLCNMIMGLTL 485

  Fly   461 LTLALWAYIRYSGELSDFGGKLDDFATLLWEKFMRPIYHGCMEKGIHHV----ATH 512
            :||..|||||||||..:.|..:|..|..||::       |...:.::.:    |||
  Rat   486 ITLCTWAYIRYSGEYRELGAVIDQVAAALWDQ-------GSTNEALYKLYSAAATH 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atlNP_651274.1 GBP 14..289 CDD:460516 173/274 (63%)
Atl1NP_001009831.1 N-terminal hypervariable region (HVR). /evidence=ECO:0000250|UniProtKB:Q8WXF7 1..34
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
GBP 43..314 CDD:460516 173/274 (63%)
3HB (three-helix bundle) domain. /evidence=ECO:0000250|UniProtKB:Q8WXF7 347..438 44/90 (49%)
Linker. /evidence=ECO:0000250|UniProtKB:Q8WXF7 439..447 6/7 (86%)
Autoinhibitory domain. /evidence=ECO:0000250|UniProtKB:Q8WXF7 521..558 3/14 (21%)
Blue background indicates that the domain is not in the aligned region.

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