DRSC/TRiP Functional Genomics Resources

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Protein Alignment atl and Atl3

DIOPT Version :10

Sequence 1:NP_651274.1 Gene:atl / 42934 FlyBaseID:FBgn0039213 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001426527.1 Gene:Atl3 / 309187 RGDID:1309871 Length:541 Species:Rattus norvegicus


Alignment Length:529 Identity:276/529 - (52%)
Similarity:374/529 - (70%) Gaps:20/529 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VQVINA-SEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSKYVHH 69
            |||:.. .|:|:|.|.|.||:.||::|.::|..|.||||||||||||||:|||.|||:||: ..|
  Rat    27 VQVVLVHKEQHSFELEERALASVLLQDHIRDLDVVVVSVAGAFRKGKSFILDFMLRYLYSQ-KEH 90

  Fly    70 DATDWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGAFDSQSTVRD 134
            ..::|||...:||.||||||||:.:||||.:||::|....|.|.::|::|:||||||||||||:|
  Rat    91 GHSNWLGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVKKPCGKEVAVVLMDTQGAFDSQSTVKD 155

  Fly   135 CATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQRLQFLVRDWSFPYE 199
            |||:||||||.||||||||||||||||||.|||||||||||:.:..:||||.|.|||||||||||
  Rat   156 CATIFALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVRDWSFPYE 220

  Fly   200 AEYGALGGDKILKRRLEVSDKQHPELQSLRRHISSCFTEVACFLMPHPGLNVATNPKFDGRLQDI 264
            ..||..||...|.:||:|.:.||.|:|::|.||.|||::|.|||:|||||.|||:|.|||:|:||
  Rat   221 YNYGLQGGMSFLDKRLQVKEHQHEEIQNVRNHIHSCFSDVTCFLLPHPGLQVATSPDFDGKLKDI 285

  Fly   265 TPEFKSSLRSLVPMLLAPDNLVYKEISGQRVRARDLIQYFQSYMNIYKGNELPEPKSMLVATAEA 329
            ..|||..|::|:|.:|.|..|:.|||:|.:|..|.|::||::|:.||:|.:||.|||||.|||||
  Rat   286 ASEFKEQLQTLIPYVLNPSKLMEKEINGSKVTCRGLLEYFKAYIKIYQGEDLPHPKSMLQATAEA 350

  Fly   330 NHLTAVAAAKELYGQLMEEVCGGTRPYLSTAHLQTEHLRVKDKALFQFAAKRKMGGEEFTEKFRK 394
            |:|.|.|:||::|...|||:|||.:||||...|:.:|...|..||..|...:||||::|:.::::
  Rat   351 NNLAAAASAKDIYYSSMEEICGGEKPYLSPDILEEKHQEFKQLALDHFKKTKKMGGKDFSFRYQQ 415

  Fly   395 QLEDDLEEVFTNYQAHNESKNIFKAARTPAVYFACAVIMYILSGIFGLVGLYTFANFCNLVMGVA 459
            :||:::.|::.|:..||.|||:|...|||||.|....::||.||:.|.:||...|...|.::|:.
  Rat   416 ELEEEITELYENFCKHNGSKNVFSTFRTPAVLFTGIAVLYIASGLTGFIGLEVVAQLFNCMVGLL 480

  Fly   460 LLTLALWAYIRYSGELSDFGGKLDDFATLLWEKFMRPIYHGCMEKGIHHVATHATEMAV-----G 519
            |:.|..|.||||||:..:.||.:|..|..:            :|:...|:. ::|:.||     |
  Rat   481 LIALLTWGYIRYSGQYLELGGAIDSGAAYV------------LEQASSHIG-NSTQAAVRDAIAG 532

  Fly   520 GGAASYRSQ 528
            ...|..:||
  Rat   533 RPPADKKSQ 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atlNP_651274.1 GBP 14..289 CDD:460516 171/274 (62%)
Atl3NP_001426527.1 N-terminal hypervariable region (HVR). /evidence=ECO:0000250|UniProtKB:Q6DD88 1..25
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Blue background indicates that the domain is not in the aligned region.

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