DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atl and Atl2

DIOPT Version :10

Sequence 1:NP_651274.1 Gene:atl / 42934 FlyBaseID:FBgn0039213 Length:541 Species:Drosophila melanogaster
Sequence 2:XP_063117669.1 Gene:Atl2 / 298757 RGDID:1305125 Length:584 Species:Rattus norvegicus


Alignment Length:540 Identity:296/540 - (54%)
Similarity:398/540 - (73%) Gaps:23/540 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VQVINASE-EHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSKYVHH 69
            ||::.|.| :|.|.|:|:||..:|:::.::|..:.||||||||||||||||||.|||||:|    
  Rat    61 VQIVLAHEDDHNFELDEEALERILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYNK---- 121

  Fly    70 DATDWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGAFDSQSTVRD 134
            |:..|:||.::||.||:||||.||:||||.:|:::|:.|.|||.|:|::|:|||||||||||::|
  Rat   122 DSQSWIGGSNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQSTIKD 186

  Fly   135 CATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQRLQFLVRDWSFPYE 199
            ||||||||||.||||:|||||||||||||||||||||||||:.:..:||||.|.||:||||:|||
  Rat   187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSYPYE 251

  Fly   200 AEYGALGGDKILKRRLEVSDKQHPELQSLRRHISSCFTEVACFLMPHPGLNVATNPKFDGRLQDI 264
            ..||..||.:.|::||:|...||.|||::|:||.:||:.:.|||:|||||.|||||.|||||:||
  Rat   252 HSYGLEGGKQFLEKRLQVKQNQHEELQNVRKHIHNCFSNLGCFLLPHPGLKVATNPSFDGRLKDI 316

  Fly   265 TPEFKSSLRSLVPMLLAPDNLVYKEISGQRVRARDLIQYFQSYMNIYKGNELPEPKSMLVATAEA 329
            ..:||..||:|||:||||:|||.|||||.:|..|||::||::|:.||:|.|||.|||||.|||||
  Rat   317 DEDFKRELRNLVPLLLAPENLVEKEISGSKVTCRDLVEYFKAYIKIYQGEELPHPKSMLQATAEA 381

  Fly   330 NHLTAVAAAKELYGQLMEEVCGGTRPYLSTAHLQTEHLRVKDKALFQFAAKRKMGGEEFTEKFRK 394
            |:|.|||.|::.|.:.||:||||.:||::.:.|:.:||.:|:.||.||.:.:||||:||..:::.
  Rat   382 NNLAAVAGARDAYCRSMEQVCGGDKPYIAPSDLERKHLDLKEVALKQFRSVKKMGGDEFCRRYQD 446

  Fly   395 QLEDDLEEVFTNYQAHNESKNIFKAARTPAVYFACAVIMYILSGIFGLVGLYTFANFCNLVMGVA 459
            |||.::||.:.|:..||:.||||.||||||..||....|||:||:.|.:||.:.|..||||||:|
  Rat   447 QLEAEIEETYANFIKHNDGKNIFYAARTPATLFAVMFAMYIISGLTGFIGLNSIAVLCNLVMGLA 511

  Fly   460 LLTLALWAYIRYSGELSDFGGKLDDFATLLWE-----KFMRPIYHGCMEKGIHHVATHATEMAVG 519
            |.:|..|||::||||..:.|..:|..|..|||     |....::.....:.:||           
  Rat   512 LTSLCTWAYVKYSGEFREIGTMIDQVAETLWEQRSPRKVFSKLFEVTRRRMVHH----------- 565

  Fly   520 GGAASYRSQTSVNASNGKVK 539
              |.|...:..::::|.|.|
  Rat   566 --ALSSAQRQRLSSNNNKKK 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atlNP_651274.1 GBP 14..289 CDD:460516 176/274 (64%)
Atl2XP_063117669.1 None

Return to query results.
Submit another query.