DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atl and ATL3

DIOPT Version :9

Sequence 1:NP_001287506.1 Gene:atl / 42934 FlyBaseID:FBgn0039213 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_056274.3 Gene:ATL3 / 25923 HGNCID:24526 Length:541 Species:Homo sapiens


Alignment Length:531 Identity:276/531 - (51%)
Similarity:376/531 - (70%) Gaps:19/531 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GSAVQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYS-KY 66
            |....|:...::|:|.|:|.||:.:|::|.::|..|.||||||||||||||:|||.|||:|| |.
Human    25 GPVQVVLVQKDQHSFELDEKALASILLQDHIRDLDVVVVSVAGAFRKGKSFILDFMLRYLYSQKE 89

  Fly    67 VHHDATDWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGAFDSQST 131
            ..|  ::|||...:||.||||||||:.:||||.:||::|..:.|.|.|:|::|:|||||||||||
Human    90 SGH--SNWLGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVEKPGGKKVAVVLMDTQGAFDSQST 152

  Fly   132 VRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQRLQFLVRDWSF 196
            |:||||:||||||.||||||||||||||||||.|||||||||||:.:..:||||.|.||||||||
Human   153 VKDCATIFALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVRDWSF 217

  Fly   197 PYEAEYGALGGDKILKRRLEVSDKQHPELQSLRRHISSCFTEVACFLMPHPGLNVATNPKFDGRL 261
            |||..||..||...|.:||:|.:.||.|:|::|.||.|||::|.|||:|||||.|||:|.|||:|
Human   218 PYEYSYGLQGGMAFLDKRLQVKEHQHEEIQNVRNHIHSCFSDVTCFLLPHPGLQVATSPDFDGKL 282

  Fly   262 QDITPEFKSSLRSLVPMLLAPDNLVYKEISGQRVRARDLIQYFQSYMNIYKGNELPEPKSMLVAT 326
            :||..|||..|::|:|.:|.|..|:.|||:|.:|..|.|::||::|:.||:|.:||.|||||.||
Human   283 KDIAGEFKEQLQALIPYVLNPSKLMEKEINGSKVTCRGLLEYFKAYIKIYQGEDLPHPKSMLQAT 347

  Fly   327 AEANHLTAVAAAKELYGQLMEEVCGGTRPYLSTAHLQTEHLRVKDKALFQFAAKRKMGGEEFTEK 391
            ||||:|.|.|:||::|...|||||||.:||||...|:.:|...|..||..|...:||||::|:.:
Human   348 AEANNLAAAASAKDIYYNNMEEVCGGEKPYLSPDILEEKHCEFKQLALDHFKKTKKMGGKDFSFR 412

  Fly   392 FRKQLEDDLEEVFTNYQAHNESKNIFKAARTPAVYFACAVIMYILSGIFGLVGLYTFANFCNLVM 456
            ::::||::::|::.|:..||.|||:|...|||||.|...|.:||.||:.|.:||...|...|.::
Human   413 YQQELEEEIKELYENFCKHNGSKNVFSTFRTPAVLFTGIVALYIASGLTGFIGLEVVAQLFNCMV 477

  Fly   457 GVALLTLALWAYIRYSGELSDFGGKLDDFATLLWEKFMRPIYHGCMEKGIHHV--ATHAT--EMA 517
            |:.|:.|..|.||||||:..:.||.:|..|..:            :|:...|:  :|.||  :..
Human   478 GLLLIALLTWGYIRYSGQYRELGGAIDFGAAYV------------LEQASSHIGNSTQATVRDAV 530

  Fly   518 VGGGAASYRSQ 528
            ||..:...::|
Human   531 VGRPSMDKKAQ 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atlNP_001287506.1 GBP 14..289 CDD:280433 172/275 (63%)
MSC <316..>471 CDD:286487 73/154 (47%)
ATL3NP_056274.3 P-loop_NTPase 37..305 CDD:304359 171/269 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 387 1.000 Domainoid score I803
eggNOG 1 0.900 - - E1_KOG2037
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 627 1.000 Inparanoid score I862
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58971
OrthoDB 1 1.010 - - D1027269at2759
OrthoFinder 1 1.000 - - FOG0001595
OrthoInspector 1 1.000 - - otm42142
orthoMCL 1 0.900 - - OOG6_102856
Panther 1 1.100 - - LDO PTHR10751
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4011
SonicParanoid 1 1.000 - - X1147
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.870

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