DRSC/TRiP Functional Genomics Resources

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Protein Alignment atl and Gbp5

DIOPT Version :10

Sequence 1:NP_651274.1 Gene:atl / 42934 FlyBaseID:FBgn0039213 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_705792.2 Gene:Gbp5 / 229898 MGIID:2429943 Length:590 Species:Mus musculus


Alignment Length:426 Identity:107/426 - (25%)
Similarity:176/426 - (41%) Gaps:90/426 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSKYVHHDAT 72
            :|.::|.| .|.|::|| ::|   ....:.|.||::.|.:|.|||:|:                 
Mouse    13 LIGSTEGH-LVTNQEAL-KIL---SAITQPVVVVAIVGLYRTGKSYLM----------------- 55

  Fly    73 DWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGAFD-SQSTVRDCA 136
            :.|.|:.   :|||.....:..|.||.||    ...:|......::||||:|..| .:...::..
Mouse    56 NKLAGKE---KGFSVGSTVQSHTKGIWMW----CVPHPQKPDHTLVLLDTEGLGDVEKDDKKNDT 113

  Fly   137 TVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALAD-------------TGKKP----- 183
            .:|||:.:|||..:||....|.:..:..|...||     |.|             .|:.|     
Mouse   114 QIFALAILLSSTFVYNTMNKIDQGAIDLLHNVTE-----LTDLLRTRNSSDSNQTEGEGPADMSF 173

  Fly   184 FQRLQFLVRDWSFPYEAEYGALGGDKILKRRLEV---SDKQHPELQSLRRHISSCFTEVACFLMP 245
            |..|.:.:||:....:|...|:..|:.|:..|::   ||::.......|..|...|....||:..
Mouse   174 FPDLVWTLRDFFLDLQANGHAITSDEYLENSLKLKQGSDERTQTFNLPRLCIQKFFPVKKCFVFD 238

  Fly   246 HPGL-----------NVATNPKFDGRLQDITPEFKSSLRSLVPMLLAPDNLVYKEISGQRVRARD 299
            .|.|           |...|..|   :||:: ||.|.:.:.......|..:   :::|.|:.:..
Mouse   239 APALGSKLSQLPTLSNEELNSDF---VQDLS-EFCSHIFTQSKTKTLPGGI---QVNGPRLESLV 296

  Fly   300 LIQYFQSYMNIYKGNELPEPKSMLVATAEANHLTAVAAAKELYGQLMEEVCGGTRPYLSTAHLQ- 363
            |     :|::......||..::.:|..|...:..||..|...|.|||.|     :..|.|..|| 
Mouse   297 L-----TYVDAINSGALPSIENTVVTLARRENSAAVQKAIGHYDQLMSE-----KVQLPTETLQE 351

  Fly   364 --TEHLRVKDKALFQFAAKRKMGGEEFTEKFRKQLE 397
              ..|...:.:|:..|   ||...::..|.|:|:||
Mouse   352 LLDLHRTCEREAIEIF---RKHSFKDEGEFFQKELE 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atlNP_651274.1 GBP 14..289 CDD:460516 75/307 (24%)
Gbp5NP_705792.2 GTPase domain (Globular). /evidence=ECO:0000250|UniProtKB:P32455 1..310 82/342 (24%)
NLRP3-binding. /evidence=ECO:0000250|UniProtKB:Q96PP8 1..306 81/338 (24%)
GBP 18..281 CDD:460516 75/300 (25%)
GBP_C 283..561 CDD:460721 30/118 (25%)
Required for tetramerization, but not for dimerization. /evidence=ECO:0000250|UniProtKB:Q96PP8 529..590
Blue background indicates that the domain is not in the aligned region.

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