DRSC/TRiP Functional Genomics Resources

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Protein Alignment atl and Gbp4

DIOPT Version :10

Sequence 1:NP_651274.1 Gene:atl / 42934 FlyBaseID:FBgn0039213 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001346008.1 Gene:Gbp4 / 17472 MGIID:97072 Length:644 Species:Mus musculus


Alignment Length:437 Identity:97/437 - (22%)
Similarity:165/437 - (37%) Gaps:95/437 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VINASEEHTFVLNEDALSEVLMRDEVKDRF---VCVVSVAGAFRKGKSFLLDFFLRYMYSKYVHH 69
            |.|.:|:  ..:|::|:       |:.|:.   |.||::.|....|||:|:              
Mouse    25 VENHNEQ--LSVNQEAI-------EILDKISQPVVVVAIVGWSHTGKSYLM-------------- 66

  Fly    70 DATDWLGGESDPLEGFSWRGGSERDTTGILMWSDIF---LH----DYPNGDKI--------AIIL 119
               :.|.|::              ..:|.|..|..|   ||    |..:.|.:        |::|
Mouse    67 ---NCLAGQN--------------HVSGTLPTSQRFPSGLHRAVSDQGHLDVVHAPPHQARALVL 114

  Fly   120 LDTQGAFD-SQSTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKP 183
            |||:|..| .:...::...:||||.:|||..:||....|....|:.|...||...|..|.:...|
Mouse   115 LDTEGLGDVEKGDPKNDLWIFALSVLLSSTFVYNSMNTINHQALEQLHYVTELTELIRAKSSPNP 179

  Fly   184 ------------FQRLQFLVRDWSFPYEAEYGALGGDKILKRRLEVSDKQHPELQ---SLRRHIS 233
                        |....:.|||:....:.....:..|:.|:..|::....:|.:|   |.|..|.
Mouse   180 HGIKNSTEFVSFFPDFVWTVRDFMLELKLNGEDITSDEYLENALKLIPGNNPRIQASNSARECIR 244

  Fly   234 SCFTEVACFLMPHPGLNVATNPKFDGRLQD-ITPEFKSSLRSLVPMLLAPDNLVYKEI----SGQ 293
            ..|....||:...|..::....:.:...:| :.|.||.|     .|..|.....|.:|    .|.
Mouse   245 RFFPNRKCFVFEWPTHDIELIKQLETISEDQLDPTFKES-----AMAFASYIFTYAKIKTLREGI 304

  Fly   294 RVRARDLIQYFQSYMNIYKGNELPEPKSMLVATAEANHLTAVAAAKELYGQLMEEVCGGTRPYLS 358
            :|....|.....:|::......:|.....:...|:..:..||..|...|.:.|.:     |..|.
Mouse   305 KVTGNGLGTLVTTYVDAINSGAVPCLDDAVTTLAQRENSVAVQKAASHYSEQMAQ-----RLSLP 364

  Fly   359 TAHLQ---TEHLRVKDKALFQFAAKRKMGGEEFTEKFRKQLEDDLEE 402
            |..:|   ..|...:.:|:..|   .:...::..::|.|:|.:.|.|
Mouse   365 TDTIQELLDVHAACEKEAMAVF---MEHSFKDENQQFLKKLVELLRE 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atlNP_651274.1 GBP 14..289 CDD:460516 70/309 (23%)
Gbp4NP_001346008.1 GBP 29..300 CDD:460516 72/315 (23%)
GBP_C 302..595 CDD:460721 23/115 (20%)

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