DRSC/TRiP Functional Genomics Resources

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Protein Alignment atl and GBP4

DIOPT Version :10

Sequence 1:NP_651274.1 Gene:atl / 42934 FlyBaseID:FBgn0039213 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_443173.2 Gene:GBP4 / 115361 HGNCID:20480 Length:640 Species:Homo sapiens


Alignment Length:464 Identity:107/464 - (23%)
Similarity:189/464 - (40%) Gaps:80/464 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SEEHTFVLNEDALSEVLMRDEVKDRF---VCVVSVAGAFRKGKSFLLDFFLRYMYSKYVHHDATD 73
            ::|....:|..||       |:.|:.   |.||::.|.:|.|||:|:                 :
Human    31 NQEEQLTVNSKAL-------EILDKISQPVVVVAIVGLYRTGKSYLM-----------------N 71

  Fly    74 WLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGAFD-SQSTVRDCAT 137
            .|.|:.:   ||......:.:|.||.||....| ..||.   .::||||:|..| .:|..::.:.
Human    72 RLAGKRN---GFPLGSTVQSETKGIWMWCVPHL-SKPNH---TLVLLDTEGLGDVEKSNPKNDSW 129

  Fly   138 VFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKP------------FQRLQFL 190
            :|||:.:|||..:||....|....|:.|...||...|..|.:..:|            |....:.
Human   130 IFALAVLLSSSFVYNSVSTINHQALEQLHYVTELAELIRAKSCPRPDEAEDSSEFASFFPDFIWT 194

  Fly   191 VRDWSFPYEAEYGALGGDKILKRRLEVSDKQHPELQSL---RRHISSCFTEVACFLMPHPGLNVA 252
            |||::...:.:...:..|:.|:..|::...::|::|:.   |..|...|.:..||:...|     
Human   195 VRDFTLELKLDGNPITEDEYLENALKLIPGKNPKIQNSNMPRECIRHFFRKRKCFVFDRP----- 254

  Fly   253 TNPKFDGRLQDITPEFKSSLRSLVPMLLAPDNL---VYKEISGQRVR------ARDLIQYFQSYM 308
            ||.|......|..||......    .|:..||.   ::.....:.:|      .:.|.....:|:
Human   255 TNDKQYLNHMDEVPEENLERH----FLMQSDNFCSYIFTHAKTKTLREGIIVTGKRLGTLVVTYV 315

  Fly   309 NIYKGNELPEPKSMLVATAEANHLTAVAAAKELYGQLMEEVCGGTRPYLSTAHLQ---TEHLRVK 370
            :......:|..::.:.|.|:..:..||..|.:.|.|.|.:     :..|.|..||   ..|...:
Human   316 DAINSGAVPCLENAVTALAQLENPAAVQRAADHYSQQMAQ-----QLRLPTDTLQELLDVHAACE 375

  Fly   371 DKALFQFAAKRKMGGEEFTEKFRKQLEDDLEEVFTNYQAHNESKNIFKAARTPAVYFACAVIMYI 435
            .:|:..|   .:...::...:|:|:|.|.:|:...::...||..:. |..:......:..:...|
Human   376 REAIAVF---MEHSFKDENHEFQKKLVDTIEKKKGDFVLQNEEASA-KYCQAELKRLSEHLTESI 436

  Fly   436 LSGIFGLVG 444
            |.|||.:.|
Human   437 LRGIFSVPG 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atlNP_651274.1 GBP 14..289 CDD:460516 74/296 (25%)
GBP4NP_443173.2 GTPase domain (Globular). /evidence=ECO:0000250|UniProtKB:P32455 1..325 77/333 (23%)
GBP 33..296 CDD:460516 74/302 (25%)
GBP_C 298..594 CDD:460721 32/157 (20%)

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