DRSC/TRiP Functional Genomics Resources

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Protein Alignment atl and rnf112.6

DIOPT Version :10

Sequence 1:NP_651274.1 Gene:atl / 42934 FlyBaseID:FBgn0039213 Length:541 Species:Drosophila melanogaster
Sequence 2:XP_017953046.2 Gene:rnf112.6 / 105948498 XenbaseID:XB-GENE-29090059 Length:560 Species:Xenopus tropicalis


Alignment Length:522 Identity:127/522 - (24%)
Similarity:226/522 - (43%) Gaps:99/522 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSKYVHHD 70
            ::::...|.....::..|:....|..|:.|..||::...|..|.|||||:::.||.:..:.....
 Frog    67 IELVYTDESGKLWVDGSAVQTCFMDPELSDLPVCLIFAIGEKRWGKSFLMNYILRALSCQERGEP 131

  Fly    71 ATDWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGAFDSQSTVRDC 135
            .:  ||.:.:||.||.|:.|.:..|.||.:|:..|:.:..:| |:|:.:|||:|:.|.||:...|
 Frog   132 LS--LGPDGEPLNGFEWKAGVDSVTKGIWIWNKPFVLEVMSG-KMAVFVLDTEGSLDIQSSQEIC 193

  Fly   136 ATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQRLQFLVRDWSFPYEA 200
            ..:.|||.:|||..|:|::.:::..:|.:|::|....:...........|.|..|:|||      
 Frog   194 IKLSALSMILSSYLIFNVNSSLKTTELNYLEMFLHVAKKTEMSFDLLYLQHLDILIRDW------ 252

  Fly   201 EYGALGG-------DKILKRRLEVSDKQHPELQSLRRHISSCFTEVACFLMPHPGLNVATNPKFD 258
             |. .||       |...|.:.::.:  |||..||.:.:.|  :.|.|.|:|.|...:..:.:  
 Frog   253 -YN-FGGCSRDDARDYFNKVKQDIDN--HPEWASLHQALHS--SMVTCSLLPRPDNKMLRSRQ-- 309

  Fly   259 GRLQDITPEFKSSLRSLVPMLLAPDNLVYKEI----SGQRVRARDLIQYFQSYMNIYKGNELPEP 319
            |||.|:...|:::|.:.:..|:..   :::.|    :||.|....|....:..::|.:..|....
 Frog   310 GRLSDMDECFRNNLTTYISDLVGN---IWRHIKTTRNGQPVSCHRLAGILKQMVDILQNEEYSFA 371

  Fly   320 KSMLVATAEANHLTAVAAAKELYGQLMEEVCGGTRP---------YLSTAHLQTEHLRVKDKALF 375
            ..|.:..:..|: .|:...||.:...::.:    .|         .:|.:.::.: :|.:..|:.
 Frog   372 SPMQLHYSFENY-KAMQQCKEQFQNALKAM----EPKSFSPIKILKMSPSDMEAK-VRNEANAML 430

  Fly   376 QFAAKRKMGGEEFTEKFRKQLED-----DLEE-VF-TNYQAHNESKNIFKAARTPAVYFACAVIM 433
            :...|...|.::  ||.|:.|.|     ||:: :| |.|      ..|..|.:|     .|    
 Frog   431 RECGKSLQGIDD--EKKRRHLADLQSQLDLQQNLFCTKY------SKIHTAVKT-----GC---- 478

  Fly   434 YILSGIFGLVGLYTFANFCNLVMGVALLTLALWAYIRYSGE------------------LSDFGG 480
             |:.|        |..:...:|.|.|.......|.|  :||                  |...||
 Frog   479 -IVGG--------TMLSVAGVVAGGAAGAAVAGAVI--AGETVGGAMGGSVLLGTIGTGLGSIGG 532

  Fly   481 KL 482
            ||
 Frog   533 KL 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atlNP_651274.1 GBP 14..289 CDD:460516 79/281 (28%)
rnf112.6XP_017953046.2 RING_Ubox 12..66 CDD:473075
P-loop containing Nucleoside Triphosphate Hydrolases 95..333 CDD:476819 76/254 (30%)
Blue background indicates that the domain is not in the aligned region.

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