DRSC/TRiP Functional Genomics Resources

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Protein Alignment atl and LOC100488013

DIOPT Version :10

Sequence 1:NP_651274.1 Gene:atl / 42934 FlyBaseID:FBgn0039213 Length:541 Species:Drosophila melanogaster
Sequence 2:XP_012823014.1 Gene:LOC100488013 / 100488013 XenbaseID:XB-GENE-29079035 Length:657 Species:Xenopus tropicalis


Alignment Length:493 Identity:113/493 - (22%)
Similarity:194/493 - (39%) Gaps:91/493 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GSAVQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSKYV 67
            |..:.:|...|.....:|::|| |:|:  |:... |.||::.|.:|.|||:|::.          
 Frog    35 GEPMCLIENKEGEELTVNQEAL-EILL--EITQP-VVVVAIVGKYRTGKSYLMNI---------- 85

  Fly    68 HHDATDWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGAFD-SQST 131
                   |.|..:...||:........|.||.||    ...:|......::||||:|..| .:..
 Frog    86 -------LAGARNEHSGFALGSTVRSKTKGIWMW----CVPHPTKKGHTLVLLDTEGLGDVEKGD 139

  Fly   132 VRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEY----------GRLA-LADTG--KKP 183
            .::.|.:|:|:.:|||..:||....|.:..:.:|...||.          |:.. :.:||  |:.
 Frog   140 SKNDAWIFSLAILLSSTLVYNSMGTIDQQAMDNLHYVTELTERIKVKSHEGKAEDMDETGEFKRF 204

  Fly   184 FQRLQFLVRDWSFPYEAEYGALGGDKILKRRLEVS---DKQHPELQSLRRHISSCFTEVACFLMP 245
            |....:.|||::...|.:...:..|:.|...||:.   .|:..:....|:.|...|....||:..
 Frog   205 FPSFIWCVRDFTLQLEKDGVPITEDQYLMDALELKRGVGKKVQDYNLPRQCIRHYFHSHKCFVFD 269

  Fly   246 HPGLNVATNPKFD-GRLQDITPEFKSSLR-SLVPMLLAPDNLVYKE------ISGQRVRARDLIQ 302
            .|.      .|.| .||:::.   :|.|. ..|...:...:.:.:.      :.|..|..|.|..
 Frog   270 RPA------SKADLQRLEELQ---ESELELEFVDKAITFCSFINQHCNAKTLVGGTIVTGRTLGN 325

  Fly   303 YFQSYMNIYKGNELPEPKSMLVATAEANHLTAVAAAKELYGQLMEEVCG----GTRPYLSTAHLQ 363
            ....|....:...:|..::.:.|.|:..:..||..|...|.:.|.:...    .|:....:.|.:
 Frog   326 LTDLYTEAIRSGSIPCMENAVKALADRENSRAVQEALTKYEEEMSKQIAKFPTETQEEFLSIHQE 390

  Fly   364 TEHLRVKDKALFQFAAKRKMGGEEFTEKFRKQLEDDLEEVFTNYQAHNESKNIFKAARTPAVYFA 428
            .|  :...|.....:.|.:.|      :::.||.|:|.|..:.|..|||.::..|          
 Frog   391 CE--KEATKVFMGLSFKDENG------QYQNQLIDELAEEKSKYSLHNEEESAKK---------- 437

  Fly   429 CAVIMY---------ILSGIFGLVGLYT-FANFCNLVM 456
            |..|:.         |..|.|...|.|| |.:..||::
 Frog   438 CKAILQKLNESLEREISEGKFSKPGGYTQFISEKNLLV 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atlNP_651274.1 GBP 14..289 CDD:460516 70/293 (24%)
LOC100488013XP_012823014.1 GBP 47..312 CDD:460516 70/298 (23%)
GBP_C 314..601 CDD:460721 40/180 (22%)

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