DRSC/TRiP Functional Genomics Resources

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Protein Alignment atl and si:dkeyp-30d6.2

DIOPT Version :9

Sequence 1:NP_001287506.1 Gene:atl / 42934 FlyBaseID:FBgn0039213 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001353308.1 Gene:si:dkeyp-30d6.2 / 100322630 ZFINID:ZDB-GENE-141222-83 Length:378 Species:Danio rerio


Alignment Length:405 Identity:98/405 - (24%)
Similarity:161/405 - (39%) Gaps:77/405 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSKYVHHD 70
            |.:||...:....:...|| :||.:.:   :.|.||:|.|.:|.|||:|::.             
Zfish     5 VCLINTDSDGKLYVQPAAL-QVLQQIQ---QPVVVVAVVGLYRTGKSYLMNH------------- 52

  Fly    71 ATDWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGAFD-SQSTVRD 134
                |.|:.   .||:..|..|..|.||.||    ...:|......::||||:|..| .:...:.
Zfish    53 ----LAGKQ---TGFALGGTIESKTKGIWMW----CVPHPTKTGTTLVLLDTEGLGDVEKGDSKH 106

  Fly   135 CATVFALSTMLSSVQIYNLSQNIQE---DDLQHLQLFTEYGRLALADTG-------KKPFQRLQF 189
            ...:|.|:.:|||..:||....|..   ::||::...||..::..:|..       .|.|....:
Zfish   107 DTNIFCLAVLLSSTLVYNSRGTINNRAIEELQYVTELTECIKVKSSDEDVDDSTEFVKFFPSFIW 171

  Fly   190 LVRDWSFPYEAEYGALGGDKILKRRLEVSDKQHPELQSL---RRHISSCFTEVACFLMPHPGLNV 251
            .|||::...:.:......|:.|:..|::......::.|.   |..|...|....||..|.|    
Zfish   172 SVRDFTLERKIDGKDATEDEYLEFALKLKPGTSKKITSFNLPRECIQKFFPTRTCFTFPFP---- 232

  Fly   252 ATNPKFDGRLQDITPEFKSSLRSLVPMLLAPDNL---------------VYKEISGQRVRARDLI 301
                        ..||..|:|.||.|..|:.:.|               |.:...|..|..|.|.
Zfish   233 ------------TAPEKMSTLESLSPADLSTEFLEVTKRFCKFVFDKSEVKRLKDGHTVTGRVLG 285

  Fly   302 QYFQSYMNIYKGNELPEPKSMLVATAEANHLTAVAAAKELYGQLMEEV-CGGTRPYLSTAHLQTE 365
            ...:.|:|......:|..::.::|.|:..::.|.....|:|.:.||:| |...   |....:.:|
Zfish   286 NLTKMYVNTISSGAVPCLENAVIAMAQIENVAATQEGLEVYQRGMEKVKCSFP---LELEQVSSE 347

  Fly   366 HLRVKDKALFQFAAK 380
            |.|:..||...|.|:
Zfish   348 HQRLSSKATQAFMAR 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atlNP_001287506.1 GBP 14..289 CDD:280433 71/303 (23%)
MSC <316..>471 CDD:286487 18/66 (27%)
si:dkeyp-30d6.2NP_001353308.1 P-loop_NTPase 13..273 CDD:328724 71/303 (23%)
GBP_C 281..>376 CDD:328214 22/85 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575015
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1027269at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.850

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