DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx18 and STX18

DIOPT Version :9

Sequence 1:NP_524485.1 Gene:Syx18 / 42933 FlyBaseID:FBgn0039212 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_058626.1 Gene:STX18 / 53407 HGNCID:15942 Length:335 Species:Homo sapiens


Alignment Length:401 Identity:128/401 - (31%)
Similarity:196/401 - (48%) Gaps:78/401 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDITQSFKASVMTVRLQRKAELAGKAKPATVPTKTGPI-----GPKDDFAKQAKEVCNKITSLRN 60
            :|||..|:|||.||:.:.||  .|.|....|......:     .||.||:.:|:||.:.|..||:
Human     3 VDITLLFRASVKTVKTRNKA--LGVAVGGGVDGSRDELFRRSPRPKGDFSSRAREVISHIGKLRD 65

  Fly    61 VLIENRTAYMRIGQHLKSA-AHMTDAQRDLIDRESEKFVTFYTQHLAKMRSDWKSAKRKPQERQH 124
            .|:|:|..|:....|..|. ..|||.:||.||::::.|:...::.:.::|::........|.::|
Human    66 FLLEHRKDYINAYSHTMSEYGRMTDTERDQIDQDAQIFMRTCSEAIQQLRTEAHKEIHSQQVKEH 130

  Fly   125 IDAVLDLLVSYLHSVEQIYLDQKKYRVQHELETYRLLKLAADKKKIPVRPAGSNSGKLGRRQVSN 189
            ..||||.:..||..|.::|.:|:..||:..::..||.||..:                       
Human   131 RTAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPE----------------------- 172

  Fly   190 DDSEATKSSSQANGNHDESADNDWNNDAWGDWDEDEEGDEVDDHDGEKGKEANQANQHKPRTRKR 254
            .:::..:|:|....:...|.|:                            |.|.|.:.:|     
Human   173 PNTKTRESTSSEKVSQSPSKDS----------------------------EENPATEERP----- 204

  Fly   255 SKANRSDLNNSSSKMALD--EELQQQQEADDDDPLSAEDVQLFEAENVHIYNFLQGVSEEVEQIE 317
                        .|:..:  .||....:...:|.||.|::|:||.||..:...:..:.:||.|||
Human   205 ------------EKILAETQPELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIE 257

  Fly   318 KNVVDIAQLQDIFTEKVAMQQHNIDRIVSAVVGTTENVKDANEQIRQATQRNAGLRVWSLFFLLV 382
            ..||:|::||:||||||..|:..||.|...|||.|||:|:.||.||:|.:.|||.|||.||||::
Human   258 GRVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVM 322

  Fly   383 MSFSLLFLDWY 393
            .||||||||||
Human   323 CSFSLLFLDWY 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx18NP_524485.1 Syntaxin-18_N 2..90 CDD:287468 35/93 (38%)
SNARE_syntaxin18 306..364 CDD:277203 30/57 (53%)
STX18NP_058626.1 Syntaxin-18_N 4..96 CDD:402222 35/93 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 168..226 13/125 (10%)
SNARE_syntaxin18 246..304 CDD:277203 30/57 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165157832
Domainoid 1 1.000 136 1.000 Domainoid score I4942
eggNOG 1 0.900 - - E1_KOG3894
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9655
Inparanoid 1 1.050 181 1.000 Inparanoid score I3998
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55795
OrthoDB 1 1.010 - - D1141750at2759
OrthoFinder 1 1.000 - - FOG0004915
OrthoInspector 1 1.000 - - oto91677
orthoMCL 1 0.900 - - OOG6_103713
Panther 1 1.100 - - LDO PTHR15959
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3600
SonicParanoid 1 1.000 - - X6026
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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