DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13625 and bud13

DIOPT Version :10

Sequence 1:NP_651272.1 Gene:CG13625 / 42931 FlyBaseID:FBgn0039210 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_001373169.2 Gene:bud13 / 564510 ZFINID:ZDB-GENE-030131-6333 Length:517 Species:Danio rerio


Alignment Length:675 Identity:225/675 - (33%)
Similarity:300/675 - (44%) Gaps:194/675 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MQKAKVIDQKEYLKKYLSGDK--EKKKKKKEKKHKKNSANTKVKIIDDD-------AYENDNLEM 58
            :.|...:.:.:|||:|||.|:  :|.|:||.||.:...:...:||:|||       |.|.:|.|.
Zfish     7 ISKGAALSKADYLKRYLSNDEADKKSKEKKVKKKRPKPSGKGMKIVDDDIDWRQLAAREEENKED 71

  Fly    59 DEDLLLGGEDAPQIVGEYIEEDPN--------VRSKWRNIAVKDEIKEEHEESS------PATGI 109
            :|      ||...:|.|.|:|.|:        ..||||.:....|..:|.|:|:      ...|.
Zfish    72 EE------EDEAPVVAEVIDERPDEIKQFEAFKTSKWRVMGATGEDLQETEDSTFNRSSDTDKGH 130

  Fly   110 RIKQEPLDEEQEMWGRKATVVKVKDEFSPSRRSSPVRIKQEKRSSSRDLSPARSSKPAKREESPQ 174
            |::.:                        |...||||   :.|..|.||||.|:     |.:|| 
Zfish   131 RLRHD------------------------SPEGSPVR---KVRHDSPDLSPKRA-----RHDSP- 162

  Fly   175 RGRRRAGSSDQSPTRRGRDGDQSPPRQKHRDSDQSPPR-KARNGNQSPVRKRRDS-DQSPPRKRT 237
                     |.||.:|||          |...|.||.| |..|.|     :|.|| ..|||| .:
Zfish   163 ---------DLSPPKRGR----------HDSPDLSPQRHKTENKN-----RRHDSLSPSPPR-LS 202

  Fly   238 GKASPTRRRRDSDQSPPRRRR----SNSDQSPPRRRRDKDSTPPRRRKDSDQSPPRRRKADDQSP 298
            .|:||:|.:|..|:....|::    |:.|.||||||   |.|  .:..||||||||||      |
Zfish   203 HKSSPSRTQRHHDKGSTHRKKMKGSSSGDLSPPRRR---DLT--GKGSDSDQSPPRRR------P 256

  Fly   299 VRRERKDSDQSPPRKRRDNDQSPVRRRRDSDQSPPRRRRDDKQTPPRRRRNSDQSPPRRPKDVDQ 363
            ..|...|||.||||||......     .|||.||||:|                :...|..|.|.
Zfish   257 HGRRDLDSDLSPPRKRGQGGGG-----SDSDLSPPRKR----------------AQGGRGSDSDL 300

  Fly   364 SPPRRKRDFDQSPTRKRDKSPRRRHDSDQSPARNHRSRERSPPPRNRFKEERKSRWAKASPSKSA 428
            |||||.|                                                    ||...|
Zfish   301 SPPRRTR----------------------------------------------------SPDGQA 313

  Fly   429 SPPPTHKPKSTKTLDGKKAGLQDAKSLKKETDERRRQEHELFEKMSSEISGRDGDVQVRSTRRKG 493
            :|         :.|.|..|||.....|:||.:|.||:|.   .....|.:.|:.:...|.   |.
Zfish   314 AP---------RMLSGGAAGLVSVDILRKEQEEIRRREK---RNQPLEEASRNAETIFRD---KS 363

  Fly   494 HRARDAANEDPAEQGRKEEHEKKKKELYDRWGKGLKQIEDHKSRLEEMVHEASKPVARYANDEDL 558
            .|.|:..:| .||..:|...:.:|.|.|.:|||||.|.|..:..:.:.:.||.||:||:.:||||
Zfish   364 GRKRNLESE-KAELSQKASEKAEKDEKYAQWGKGLAQGEMQEQNVIDAIREAEKPLARHIDDEDL 427

  Fly   559 DRHLREQEHADDPMLEYMRQKRKKRDQQDNKPVMPKYEG-SFPENRFGIRPGYRWDGVDRSNGYE 622
            ||.|||||...|||...:|:|:.|..:.......|:|:| ..|.|||.|.|||||||||||||:|
Zfish   428 DRMLREQEREGDPMAAMLRKKKDKTAKLKGVKEKPRYKGPPPPPNRFNIMPGYRWDGVDRSNGFE 492

  Fly   623 QRWFDKQNERRAVQDEAYKYSVEDM 647
            |:.:.:..:.:|||:.|||:|||||
Zfish   493 QKRYSRMADNKAVQEMAYKWSVEDM 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13625NP_651272.1 PRK12678 124..>339 CDD:237171 82/220 (37%)
U2AF_lg 300..>419 CDD:273727 27/118 (23%)
Bud13 490..630 CDD:462867 63/140 (45%)
bud13NP_001373169.2 None

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