DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Esyt2 and SYTC

DIOPT Version :9

Sequence 1:NP_001247287.1 Gene:Esyt2 / 42929 FlyBaseID:FBgn0266758 Length:853 Species:Drosophila melanogaster
Sequence 2:NP_974729.1 Gene:SYTC / 830301 AraportID:AT5G04220 Length:540 Species:Arabidopsis thaliana


Alignment Length:512 Identity:125/512 - (24%)
Similarity:233/512 - (45%) Gaps:82/512 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 VILARIDELPAWVYFPDVERCEWLNKILKQVWPNANHFARTLVKETIEPNVALALANYKMHGFRF 202
            |:|..:.::|.|:..||.||.:|.||.:..:||..:.....:::.:::|..|..:..:.:....|
plant    51 VLLDLLPDIPLWMKNPDYERVDWFNKFISYMWPYLDKAVCGIIRSSVQPLFADYIGTFCIESIEF 115

  Fly   203 DRIILGTIPPRIGGVKIYDKNVDRNEIIMDLDLFYASDCDINFYLGGMKGGIK----DFQIHGWV 263
            :.:.|||:||.:.|||.|:.|  ..|::.:..:.:|.:.:|...|..:...|:    |.|....|
plant   116 ENLSLGTLPPTVHGVKFYETN--EKELLFEPSIKWAGNPNIVLVLKVLSLRIRVQLVDLQFFAIV 178

  Fly   264 RVVMKPLIRSMPLVGGLQIFFLNNPNIDFNL--VGVIDFMDMPGLSDLLRRIIVEQIGNVMVLPN 326
            ||.:|||:.:.|..|.:.:..:..|::||.|  :|. |.|.:|||...::..|..|:.::...|.
plant   179 RVALKPLLPTFPCFGMVVVSLMEKPHVDFGLKVLGG-DLMSIPGLYRYVQETIKRQVSSMYHWPQ 242

  Fly   327 KLPISLSEEVSAVALKMPEPEGILRIHVVEAKDLMKKDISVLGKGKSDPYAIINVGAQEF---KT 388
            .|.|.:.:..:|   .:.:|.|:|.:.::.|::|:|||:    .|.||||..:::..::.   ||
plant   243 VLEIPILDSSTA---SVKKPVGLLHVSILRARNLLKKDL----LGTSDPYVKLSLTGEKLPAKKT 300

  Fly   389 QIIDNNVNPKWDYWCEACIFTTIGHYIGFSLWDYDQTMPGVQSDDVLGRASIDIASV-------- 445
            .|...|:||:|:...:..:.......:...::|:|:    |...|.||...|.:..:        
plant   301 TIKKRNLNPEWNEHFKLIVKDPNSQVLQLEVFDWDK----VGGHDRLGMQMIPLQKINPGERKEF 361

  Fly   446 ----IKKG--VVDSWLTLEDAKHGLLHVRLQWY----------------KLTADPNDLQQILLET 488
                ||..  |:||.   :..|.|.|.|.|::.                |.:.|.:.|.|     
plant   362 NLDLIKNSNVVMDSG---DKKKRGRLEVDLRYVPFREESIKRRKESREEKSSEDDDFLSQ----- 418

  Fly   489 QLLRVTSMSSAVLSVFIDSARHLKQARSSSKPDPYLVCSVNKQKQQTAMIMRDDSPVWEQGFTFL 553
                     :.:|||.:.||:.::..:..|  :||.|.....:|::|.|:.:...|.|.:.|.|.
plant   419 ---------AGLLSVAVQSAKDVEGKKKHS--NPYAVVLFRGEKKKTKMLKKTRDPRWNEEFQFT 472

  Fly   554 VSNPD-NESLNIKIYDQKTG------NDIGQYTYTLSTLLKQFNMEVIQQPFQLQKS 603
            :..|. .||:.:::..:.||      .::|.....|..::....   |.|.:.|..|
plant   473 LEEPPVKESIRVEVMSKGTGFHFRSKEELGHVDINLDDVVDNGR---INQKYHLINS 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Esyt2NP_001247287.1 SMP_LBD 154..332 CDD:293652 51/183 (28%)
C2A_Synaptotagmin-like 348..471 CDD:175990 36/139 (26%)
C2B_Synaptotagmin-like 500..605 CDD:176015 27/111 (24%)
C2C_KIAA1228 719..847 CDD:175996
SYTCNP_974729.1 DUF456 <7..>30 CDD:398136
COG5038 67..>538 CDD:227371 120/496 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 101 1.000 Domainoid score I2321
eggNOG 1 0.900 - - E1_COG5038
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 159 1.000 Inparanoid score I1645
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D52746at2759
OrthoFinder 1 1.000 - - FOG0000510
OrthoInspector 1 1.000 - - otm3072
orthoMCL 1 0.900 - - OOG6_100476
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X61
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.770

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