DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5789 and ABCC6

DIOPT Version :9

Sequence 1:NP_001247286.1 Gene:CG5789 / 42928 FlyBaseID:FBgn0039207 Length:1402 Species:Drosophila melanogaster
Sequence 2:NP_187916.3 Gene:ABCC6 / 820497 AraportID:AT3G13090 Length:1466 Species:Arabidopsis thaliana


Alignment Length:1425 Identity:452/1425 - (31%)
Similarity:687/1425 - (48%) Gaps:227/1425 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PRQHANIISQLIFAWAIPLLYRGSRRGLNTDDLTQCLKEDRSEQL----GDRLEDQWFKELERSH 72
            |...|.|:|::.|:|..||:..|:.:.::..|:.|..:.|.:|.|    ..:||  |    :...
plant   208 PFSKAGILSRMSFSWMSPLITLGNEKIIDIKDVPQLDRSDTTESLFWIFRSKLE--W----DDGE 266

  Fly    73 RKKQKPHLRNALFRCFLGPTIINGLICFIYIVIKTLIPAVLAQLLIQFQKTPVAQLRNIDVNDIS 137
            |:.....|..|||.......:::.|:.|:|.|...:.|                           
plant   267 RRITTFKLIKALFLSVWRDIVLSALLAFVYTVSCYVAP--------------------------- 304

  Fly   138 ISDSLNRTARAIPNYVLSQAVANSSGSPGDALFPKSLDKAGPLEPIQPPVEEVDHNATAVRSILD 202
                          |::...|...:|:                                 |...:
plant   305 --------------YLMDNFVQYLNGN---------------------------------RQYKN 322

  Fly   203 QTVEHMWNDMNSLGAVLVLSTLFCCFLLHHVDLRQ-----RLMGARMRIACCSLIYRKTLRLSMK 262
            |            |.||| :|.|...|:.....||     :..|..||....|:||.|.|.|...
plant   323 Q------------GYVLV-TTFFVAKLVECQTQRQWFFRGQKAGLGMRSVLVSMIYEKGLTLPCH 374

  Fly   263 TAGQTPAGYLINLLSNDVNRLDYGFIFMHWIWIMPLQAMLTCYLIWLNIG---IPAIVGVVGLLL 324
            :.....:|.:|||::.|.:|:.....|||..||:.||..|..::::.::|   |.|....:.::|
plant   375 SKQGHTSGEIINLMAVDADRISAFSWFMHDPWILVLQVSLALWILYKSLGLGSIAAFPATILVML 439

  Fly   325 KTVPVQTALSKVTSVLRMRIAERTDARVGIMNELVQGIQVIKMYAWEKPFQAVVAEARRSEIKQI 389
            ...|    .:|:....:..:.:..|.|:...:|::..::::|:..||..|.:.:.|.|..|    
plant   440 ANYP----FAKLEEKFQSSLMKSKDNRMKKTSEVLLNMKILKLQGWEMKFLSKILELRHIE---- 496

  Fly   390 RYASYLRGFY-----LSTMVFTERSTLYIT-LAAAALMGQTITADFVFSAASYYNILQLVAAIW- 447
              |.:|:.|.     ::::::...|.:..| ..|..|:...:.:..:.:|.:.:.|||  ..|: 
plant   497 --AGWLKKFVYNSSAINSVLWAAPSFISATAFGACLLLKIPLESGKILAALATFRILQ--GPIYK 557

  Fly   448 YPLAVSFGAEALVSLRRIQDFLMLEGREERTQGLTHKRDQEGGDSRAVTIKDINASWDIEKPQKT 512
            .|..:|...:..|||.||..||.|:..::...|    |...|....||.|.:...|||...|..|
plant   558 LPETISMIVQTKVSLNRIASFLCLDDLQQDVVG----RLPSGSSEMAVEISNGTFSWDDSSPIPT 618

  Fly   513 LQSINLQIEKGQLCAVIGPVGAGKSSILQLLLGELPVIDGGVFIQGDLSYAAQEPWLFTGSVRNN 577
            |:.:|.::.:|...|:.|.||:||||:|..:|||:|.|.|.:.:.|..:|.||.||:.:|.|..|
plant   619 LRDMNFKVSQGMNVAICGTVGSGKSSLLSSILGEVPKISGNLKVCGRKAYIAQSPWIQSGKVEEN 683

  Fly   578 ILFGEEFDRKRYQEVTRCCALSTDFQQLPNGDKTLVGERGASLSGGQRARISLARAVYKPAQIYL 642
            ||||:..:|:.|..|...|:|:.|.:.||..|:|::||||.:|||||:.||.:|||:|:.|.|||
plant   684 ILFGKPMEREWYDRVLEACSLNKDLEILPFHDQTVIGERGINLSGGQKQRIQIARALYQDADIYL 748

  Fly   643 MDDPLSAVDAHVGRHLFDEVIGPRGRLAQLK-ATRILVTHQVHFLSEADVIVIVDQGRILRQGTY 706
            .|||.||||||.|.|||.||:     |..|: .|.|.|||||.||.|||:|:::..|:|.:.|.|
plant   749 FDDPFSAVDAHTGSHLFKEVL-----LGLLRHKTVIYVTHQVEFLPEADLILVMKDGKITQAGKY 808

  Fly   707 QELINSDLDFARLLERPKEEEEGENSRNQTSPLSVNSLESDDEDIPFIDGVKDGYQQLR----KQ 767
            .|:::|..||..|:        |.::                |.:..||..:.||...:    |:
plant   809 HEILDSGTDFMELV--------GAHT----------------EALATIDSCETGYASEKSTTDKE 849

  Fly   768 SSSVH-------GSKSLDSTQLDDNVDEDDLAEAQASGGISPRVWYEYF---HAGSTLLSFSFMV 822
            :..:|       ||.:..|.||   |.|    |.:..|.:...|:.:|.   :.|:.:   ..::
plant   850 NEVLHHKEKQENGSDNKPSGQL---VQE----EEREKGKVGFTVYKKYMALAYGGAVI---PLIL 904

  Fly   823 FVMVMSQVVCSSSDFFANIWTQQEHQRSQGEATFSTFECMYIYGALIIAVVIMTTFRGFLF---- 883
            .|.|:.|::...|:::.. |.....:  ..|...|.|..:.:|..|.:|.......|..|.    
plant   905 VVQVLFQLLSIGSNYWMT-WVTPVSK--DVEPPVSGFTLILVYVLLAVASSFCILIRALLVAMTG 966

  Fly   884 FKICMHASKVLHDRMFACILHATMRFFDTTPSGRILNRFSKDMGAIDELLPRAMMDFIQIALVMF 948
            ||:.......:|.|:|    .|:|.|||.||.||||||.|.|....|..||.   .|..:|:...
plant   967 FKMATELFTQMHLRIF----RASMSFFDATPMGRILNRASTDQSVADLRLPG---QFAYVAIAAI 1024

  Fly   949 GILIVIGILNPVLVAAMLVVAVVDVLIL-----KLYLRPSQDLKRLEGICRSPVFSHLSASLTGL 1008
            .||.:||::  |.||..:::..:.|:..     :.|:..:::|.||.||.||||..|.|.:|:|:
plant  1025 NILGIIGVI--VQVAWQVLIVFIPVVAACAWYRQYYISAARELARLAGISRSPVVHHFSETLSGI 1087

  Fly  1009 AIIRSRQLQDVVAKEFDLLQDVHSSV-WQLTMAVNTTLGLWLDCVSCIFLTSVTFSFIISSETTY 1072
            ..|||...:.....:...|.|.:|.: :..|.|:.     || |.....|:  ||:|..|.....
plant  1088 TTIRSFDQEPRFRGDIMRLSDCYSRLKFHSTGAME-----WL-CFRLELLS--TFAFASSLVILV 1144

  Fly  1073 SGN--------VGLAIAQAMILTGMVQYGVRQVAESLQQMTSVERVLQYTELEQEPALGEKT--P 1127
            |..        .||||..|:.|..:....:..:.:...:|.||||:||||.:..||.|..:|  |
plant  1145 SAPEGVINPSLAGLAITYALNLNTLQATLIWTLCDLENKMISVERMLQYTNIPSEPPLVIETTRP 1209

  Fly  1128 PQQWPTRGQVEFRNMSCRYDPNGSPVLRNLNLTIEAGWKVGIVGRTGAGKSSLIGALFRLAH-IE 1191
            .:.||:||::...|:..||.|:...||..|..|...|.|.|||||||.|||:||..|||:.. ..
plant  1210 EKSWPSRGEITICNLQVRYGPHLPMVLHGLTCTFPGGLKTGIVGRTGCGKSTLIQTLFRIVEPAA 1274

  Fly  1192 GEIFIDGIETGTISLEILRTRISIIPQDPVLFSATIRYNLDPFERYTDAELWSALEDV----ELR 1252
            |||.||||...:|.|..||:|:|||||||.:|..|||.||||.|.|||.::|.||::.    |:|
plant  1275 GEIRIDGINILSIGLHDLRSRLSIIPQDPTMFEGTIRSNLDPLEEYTDDQIWEALDNCQLGDEVR 1339

  Fly  1253 KAIPGLDYMVTERGGNFSVGQRQLLCLARAILRNNKVLVLDEATANVDPQTDALIQRTIRIKFKQ 1317
            |....||..|:|.|.|:|||||||:||.|.:|:.:|:||||||||::|..||.|||.|:|..|..
plant  1340 KKELKLDSPVSENGQNWSVGQRQLVCLGRVLLKRSKLLVLDEATASIDTATDNLIQETLRHHFAD 1404

  Fly  1318 CTVLTVAHRLHTVMDSDRIIVMDAGVAVEFDVPYLLLKKSQGHLRQMVEATGGESEALKK 1377
            |||:|:|||:.:|:|||.::::|.|:..|.|.|..||:.......::|......||:..|
plant  1405 CTVITIAHRISSVIDSDMVLLLDQGLIKEHDSPARLLEDRSSLFSKLVAEYTTSSESKSK 1464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5789NP_001247286.1 CFTR_protein 9..1367 CDD:273530 449/1413 (32%)
ABC_membrane 214..441 CDD:294371 57/240 (24%)
ABCC_MRP_domain1 495..699 CDD:213217 97/204 (48%)
ABC_membrane 863..1088 CDD:294371 75/242 (31%)
ABCC_MRP_domain2 1135..1350 CDD:213211 113/219 (52%)
ABCC6NP_187916.3 PLN03232 67..1452 CDD:215640 448/1411 (32%)
ABC_membrane 286..555 CDD:294371 69/367 (19%)
ABCC_MRP_domain1 601..801 CDD:213217 97/204 (48%)
ABC_membrane 902..1173 CDD:294371 83/290 (29%)
ABCC_MRP_domain2 1217..1437 CDD:213211 113/219 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.720

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