DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5789 and Abcb10

DIOPT Version :9

Sequence 1:NP_001247286.1 Gene:CG5789 / 42928 FlyBaseID:FBgn0039207 Length:1402 Species:Drosophila melanogaster
Sequence 2:NP_062425.1 Gene:Abcb10 / 56199 MGIID:1860508 Length:715 Species:Mus musculus


Alignment Length:633 Identity:160/633 - (25%)
Similarity:269/633 - (42%) Gaps:160/633 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   819 SFMVFVMVMSQVVCSSSDFFAN-----IWTQQEHQRSQGEATFST-----FECMYIYGALIIAVV 873
            |..|..:.:|.|:..|:.||..     |:|..    |:|.....|     ..|:::.||....: 
Mouse   137 SAAVGFLAVSSVITMSAPFFLGRIIDVIYTNP----SEGYGDSLTRLCAVLTCVFLCGAAANGI- 196

  Fly   874 IMTTFRGFLFFKICMHASKVLHDRMFACILHATMRFFDTTPSGRILNRFSKDMGAI--------- 929
                 |.:|...........|...:|:.||...:.|||.|.:|.::||.|.|...:         
Mouse   197 -----RVYLMQSSGQSIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLS 256

  Fly   930 DELLPRA-------MMDFIQIALVMFGILIVIGILNPVLVAAMLVVAVVDVLILKLYLRPSQD-- 985
            |.|...|       ||.|:..:|..|    |:.::.|:     .|:||:....|:...:.:||  
Mouse   257 DGLRAGAQASVGVGMMFFVSPSLATF----VLSVVPPI-----SVLAVIYGRYLRKLSKATQDSL 312

  Fly   986 ---------------------------------------LKRLEGICRSPVFSHLSASLTGLAII 1011
                                                   |.:.|.:.|:..|.  :|.|:|..|:
Mouse   313 AEATQLAEERIGNIRTIRAFGKEMTEVEKYTGRVDQLLQLAQKEALARAGFFG--AAGLSGNLIV 375

  Fly  1012 RSRQLQDVVAKEFDLLQDVHSSVWQLTMAVNTTLGLWLDCVSCIFLTSVTFSFIISSETTYSGNV 1076
            .|     |:.|...|:...|.:|.:|:                        ||::     |:..|
Mouse   376 LS-----VLYKGGLLMGSAHMTVGELS------------------------SFLM-----YAFWV 406

  Fly  1077 GLAIAQAMILTGMVQYGVRQVAESLQQMTSVERVLQYTELEQEP--------ALGEKTPPQQWPT 1133
            ||:|.      |:..:    .:|.::.:.:..|:.:.  ||::|        .|.|||      .
Mouse   407 GLSIG------GLSSF----YSELMKGLGAGGRLWEL--LERQPRLPFNEGMVLDEKT------F 453

  Fly  1134 RGQVEFRNMSCRYD--PNGSPVLRNLNLTIEAGWKVGIVGRTGAGKSSLIGALFRLAH-IEGEIF 1195
            :|.:||||:...|.  |..| |.::.:|:|.:|....:||.:|:|||:::..|.||.. ..|.:.
Mouse   454 QGALEFRNVHFTYPARPEVS-VFQDFSLSIPSGSVTALVGPSGSGKSTVVSLLLRLYDPNSGTVS 517

  Fly  1196 IDGIETGTISLEILRTRISIIPQDPVLFSAT----IRYNLDPFERYTDAELWSALE---DVELRK 1253
            :||.:...::...||::|..:.|:|||||.:    |.|..|.....|..::..|.|   ..|..:
Mouse   518 LDGHDIRQLNPVWLRSKIGTVSQEPVLFSCSVAENIAYGADNLSSVTAQQVERAAEVANAAEFIR 582

  Fly  1254 AIP-GLDYMVTERGGNFSVGQRQLLCLARAILRNNKVLVLDEATANVDPQTDALIQRTIRIKFKQ 1317
            :.| |.|.:|.|:|...|.||:|.:.:|||:|:|.|:|:|||||:.:|.:.:.|:|..:....:.
Mouse   583 SFPQGFDTVVGEKGILLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEHLVQEALDRLMEG 647

  Fly  1318 CTVLTVAHRLHTVMDSDRIIVMDAGVAVEFDVPYLLLKKSQGHLRQMV 1365
            .|||.:||||.|:.:::.:.|:|.|...|......||.|..|..|:::
Mouse   648 RTVLIIAHRLSTIKNANFVAVLDHGKICEHGTHEELLLKPNGLYRKLM 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5789NP_001247286.1 CFTR_protein 9..1367 CDD:273530 160/633 (25%)
ABC_membrane 214..441 CDD:294371
ABCC_MRP_domain1 495..699 CDD:213217
ABC_membrane 863..1088 CDD:294371 55/281 (20%)
ABCC_MRP_domain2 1135..1350 CDD:213211 77/225 (34%)
Abcb10NP_062425.1 3a01208 8..694 CDD:273363 160/630 (25%)
ABC_membrane 142..403 CDD:279056 61/315 (19%)
ABC_MTABC3_MDL1_MDL2 458..698 CDD:213216 81/239 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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