DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5789 and abcc10

DIOPT Version :9

Sequence 1:NP_001247286.1 Gene:CG5789 / 42928 FlyBaseID:FBgn0039207 Length:1402 Species:Drosophila melanogaster
Sequence 2:XP_005155817.1 Gene:abcc10 / 556709 ZFINID:ZDB-GENE-050517-24 Length:1548 Species:Danio rerio


Alignment Length:1452 Identity:451/1452 - (31%)
Similarity:712/1452 - (49%) Gaps:229/1452 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ANIISQLIFAWAIPLLYRGSRRGL-NTDDLTQCLKEDRSEQLGDRLEDQWFK-----ELERSHRK 74
            ::::|:|::.|..|||.||.|..| ...|:.:.....|::.:..|....|.|     .|||..|.
Zfish   231 SSLLSRLLYLWLNPLLNRGKRGELGRPSDVFELPSRLRTKSVTRRFYQCWEKCLHSRALERPERP 295

  Fly    75 KQKPHLRNALFRCFLGPTIINGLICFIYIVIKTLIPAVLAQLLIQFQKTPVAQLRNI----DVND 135
            .::|...                                    :|......||...|    ..::
Zfish   296 DRRPRGN------------------------------------LQDNSWSEAQPERICEGEAEHE 324

  Fly   136 ISISDSLNRTARAIPNYVLSQAVANSSGSPGDALFPKSLDKAGPLEPIQPPVEEVDHNATAVRSI 200
            :.:...|:: |..:..|:|.          |..|....|..||||                   :
Zfish   325 VKLLQVLHK-AFGLRYYLLG----------GLKLVASMLAFAGPL-------------------L 359

  Fly   201 LDQTVEHMWNDMNSLG-----AVLVLSTLFCCFLLHHVDLRQ-RLMGARMRIACCSLIYRKTLRL 259
            |...|..|..:...|.     ||.:.::.|...||.::.:.: ..:....|.|..|.||.|.|::
Zfish   360 LGGLVGFMETEGAPLSKGVWCAVGLFASTFLAALLKNIFVYEVSKVALEARAAVISTIYCKALKV 424

  Fly   260 SMKTAGQTPAGYLINLLSNDVNRLDYGFIFMHWIWIMPLQAMLTCYLIWLNIGIPAIVGVVGLLL 324
            :..:..:...|.::|.:|.|.:|:...|...|.:|.:|.|.:|..||::|.:|: |.:|.||:.:
Zfish   425 NAPSLARFNMGEVVNFMSTDTDRVVNFFNSFHEVWSLPFQFVLALYLLYLQVGV-AFLGGVGVAV 488

  Fly   325 KTVPVQTALSKVTSVLRMRIAERTDARVGIMNELVQGIQVIKMYAWEKPFQAVVAEARRSEIKQI 389
            ..||:...|:.........:.:..|.||.:|.|::.||:|:|.|.||:.|...:.|||:.|:..:
Zfish   489 LLVPLNKVLASRILENNKHMLQHKDGRVKLMTEILFGIRVLKYYNWEEHFTQKIEEARKKELHHL 553

  Fly   390 RYASYLRGFYLSTMVFTERSTLYITLAAAALMGQTITADFVFSAASYYN--ILQLVAAIWYPLAV 452
            :...||....:.|..........:|.....|:|..:||..|||..:...  ||.|.|   :|..:
Zfish   554 KLLKYLDAVCVYTWAALPVVISILTFITYVLLGNNLTAAKVFSTLALVGMLILPLNA---FPWVL 615

  Fly   453 SFGAEALVSLRRIQDFLMLEGRE-----------------ERTQGLTHKRDQEGGDSRAVTIKDI 500
            :...||.|||.|||.||.::.::                 :..|.....:..|..||  |:|.| 
Zfish   616 NGTLEAKVSLDRIQRFLAVQDQDLSVYYSQVCPEDPPSAVQMVQASFSWKQSEEADS--VSIPD- 677

  Fly   501 NASWDIEK---PQKT--LQSINLQIEKGQLCAVIGPVGAGKSSILQLLLGELPVIDGGVFIQG-- 558
                ||.:   |.::  |.::||.::.|.|..|:|.||.||||:|..:.|||....|.||:||  
Zfish   678 ----DITEEGSPPRSFYLHALNLNVKMGSLVVVVGKVGCGKSSLLAAITGELTRCGGEVFVQGRE 738

  Fly   559 -DLSYAAQEPWLFTGSVRNNILFGEEFDRKRYQEVTRCCALSTDFQQLPNGDKTLVGERGASLSG 622
             ....|.||||:...:|::|||||.::|...||.|.:.|||:.|...||.||:|.|||.|.:|||
Zfish   739 QGFGLAVQEPWIQHATVQDNILFGRDYDNMFYQSVIQACALADDLNILPGGDQTEVGENGVTLSG 803

  Fly   623 GQRARISLARAVYKPAQIYLMDDPLSAVDAHVGRHLFDEVIGPRGRLAQLK-ATRILVTHQVHFL 686
            ||::|::||||||...:|||:||||:||||.|..||.::.|     |..|| .||||.||::.|:
Zfish   804 GQKSRLALARAVYMDKEIYLLDDPLAAVDADVAHHLMEKCI-----LGILKDKTRILCTHRIEFV 863

  Fly   687 SEADVIVIVDQGRILRQGTYQELINSDLDFARLLERPKEEEEGENSRNQTSPLSVNSLESDDEDI 751
            .:|||:|::|.|.|::.|...|:::       |::.||:.:...|::.:.|.             
Zfish   864 DKADVVVLMDNGMIVKTGAPSEVLS-------LVKGPKDSKNSSNAKEKDSA------------- 908

  Fly   752 PFIDGVKDGYQQLRKQSSSVHGSKSLDSTQLDDNVDEDDLAEAQAS-GGISPRVWYEYFHA--GS 813
                                 ||:.:::::.:...:.:...|.|.. |.:|..|:..|:.|  |.
Zfish   909 ---------------------GSEEMEASEPELKAELEMFGEEQKQMGTLSWAVYRSYWKAVGGC 952

  Fly   814 TLLSFSFMVFVMVMSQVVCSSSDFFANIWTQQEHQR----------------------------- 849
            ..::....:|:|..|:.|   ||::.:.|.  .|.:                             
Zfish   953 MAVAVLLALFLMQASKNV---SDWWLSHWI--SHMKDNMTELVSVSATPLLMLSFLSPGRLVFNA 1012

  Fly   850 ------SQGEATFSTFECMYIYGALIIAVVIMTTFRGFLFFKICMHASKVLHDRMFACILHATMR 908
                  |.|..:......|.:||:|..|..:.|..|.|||....:.|:.|:|.|:.:.:|.|||.
Zfish  1013 PARGSESSGNMSSELKFYMTVYGSLAAANTVFTAARAFLFAYGAICAATVVHKRLLSSVLKATMT 1077

  Fly   909 FFDTTPSGRILNRFSKDMGAIDELLPRAMMDFIQIALVMFGILIVIGILNPVLVAAMLVVAVVDV 973
            ||||||.||||||||.|:.::|:.||..:...:.....:.|:|||:....|.::..::.:..:..
Zfish  1078 FFDTTPLGRILNRFSSDIYSVDDSLPFVLNILLANVFGLLGMLIVMSYGLPWVLLPLVPLGALYY 1142

  Fly   974 LILKLYLRPSQDLKRLEGICRSPVFSHLSASLTGLAIIRSRQLQDVVAKEFD-LLQDVHSSVWQL 1037
            .....|...|::||||..:..|||:||.|.:|:||:.:|.........:|.: .|:.....::..
Zfish  1143 QTQCFYRYSSRELKRLCSLTLSPVYSHFSETLSGLSTVRGSGHTTRFEEENERRLEQNQRCLFNS 1207

  Fly  1038 TMAVNTTLGLWLDC-VSCIFLTSVTFSFIIS-----SETTYSGNVGLAIAQAMILTGMVQYGVRQ 1096
            ..|:.     |||. :..|.:|.||...:|:     .::...|.|||:::.|:.:|.::...:..
Zfish  1208 NAAMQ-----WLDIRLQMIAVTVVTGISVIAVIQHQLKSIDPGLVGLSLSYALSITNLLSGLIFS 1267

  Fly  1097 VAESLQQMTSVERVLQY-TELEQEPALGEKTPPQQWPTRGQVEFRNMSCRYDPNGSPVLRNLNLT 1160
            .|::..|:.|:||..:| |.:.|||.........:||.|.:|||.::...|.|.....|..:::.
Zfish  1268 YAQTEMQLVSIERTEEYSTSIPQEPQQASLEVLDRWPERARVEFVDVVLSYRPGLPNALDGVSVE 1332

  Fly  1161 IEAGWKVGIVGRTGAGKSSLIGALFRLAHI-EGEIFIDGIETGTISLEILRTRISIIPQDPVLFS 1224
            :..|.|:|||||||:|||||..||||:..: :|:|.:||::..::.|..||::::||||||.|||
Zfish  1333 VLPGEKIGIVGRTGSGKSSLFLALFRMVELNQGQILLDGVDISSVRLSDLRSKLAIIPQDPFLFS 1397

  Fly  1225 ATIRYNLDPFERYTDAELWSALEDVELRKAIP---GLDYMVTERGGNFSVGQRQLLCLARAILRN 1286
            :::|.||||..|:.|..|..|||...|...:.   |||..|.|||.:.|||||||||||||:|..
Zfish  1398 SSVRENLDPHGRHPDYRLLEALEQCHLGNVVQRNGGLDSEVGERGKSLSVGQRQLLCLARALLTE 1462

  Fly  1287 NKVLVLDEATANVDPQTDALIQRTIRIKFKQCTVLTVAHRLHTVMDSDRIIVMDAGVAVEFDVPY 1351
            ..:|.:|||||:||.:||.|:|:|||.|||..||||:||||:|:||||:::||.||..||||.|.
Zfish  1463 ANILCIDEATASVDQKTDMLLQKTIREKFKDKTVLTIAHRLNTIMDSDKVLVMHAGKVVEFDSPA 1527

  Fly  1352 LLLKKSQGHLRQMVEATGGESE 1373
            .|.::.....::::.  |||.:
Zfish  1528 TLCQREDSAFQKLLR--GGEDQ 1547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5789NP_001247286.1 CFTR_protein 9..1367 CDD:273530 448/1444 (31%)
ABC_membrane 214..441 CDD:294371 64/234 (27%)
ABCC_MRP_domain1 495..699 CDD:213217 98/212 (46%)
ABC_membrane 863..1088 CDD:294371 72/231 (31%)
ABCC_MRP_domain2 1135..1350 CDD:213211 112/218 (51%)
abcc10XP_005155817.1 SunT 248..1531 CDD:331423 442/1415 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.720

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