DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5789 and abcc4

DIOPT Version :9

Sequence 1:NP_001247286.1 Gene:CG5789 / 42928 FlyBaseID:FBgn0039207 Length:1402 Species:Drosophila melanogaster
Sequence 2:NP_001007039.2 Gene:abcc4 / 368620 ZFINID:ZDB-GENE-030616-511 Length:1331 Species:Danio rerio


Alignment Length:1415 Identity:569/1415 - (40%)
Similarity:835/1415 - (59%) Gaps:143/1415 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSSAKPTRK----NPRQHANIISQLIFAWAIPLLYRGSRRGLNTDDLTQCLKEDRSEQLGDRLE 61
            |.|..:|.:|    ||...||:.||:.|.|..||...||:|.|..||:...|.||||::||:.|:
Zfish     1 MTSDMEPIKKDAKSNPSASANLFSQIFFCWLNPLFSIGSKRRLEEDDMFNVLPEDRSKKLGEELQ 65

  Fly    62 DQWFKELERSHRKKQKPHLRNALFRCFLGPTIINGLICFIYIVIKTLIPAVLAQLLIQFQKTPVA 126
            ..|.:|.|::.::.:.|.|..|:.||:.....:.|:...|...||.:.|..|.:|:..|:     
Zfish    66 SYWDQEKEKAAKELKTPKLTKAIIRCYWKSYAVLGVFTLIEESIKVIQPVFLGKLIKYFE----- 125

  Fly   127 QLRNIDVNDISISDSLNRTARAIPNYVLSQAVANSSGSPGDALFPKSLDKAGPLEPIQPPVEEVD 191
               |...:|::               .||:|...::|                            
Zfish   126 ---NYRHDDMA---------------ALSEAYGYATG---------------------------- 144

  Fly   192 HNATAVRSILDQTVEHMWNDMNSLGAVLVLSTLFCCFLLHHVDLR--QRLMGARMRIACCSLIYR 254
                                       :.||||... ||||:...  || .|.::|||.|.:|||
Zfish   145 ---------------------------VCLSTLGLA-LLHHLYFYHVQR-AGMKIRIAMCHMIYR 180

  Fly   255 KTLRLSMKTAGQTPAGYLINLLSNDVNRLDYGFIFMHWIWIMPLQAMLTCYLIWLNIGIPAIVGV 319
            |.|.||....|||..|.::||||||||:.|...||:|::|:.||||.....|:|..|| |:.:..
Zfish   181 KALCLSAAAMGQTTTGQIVNLLSNDVNKFDELTIFLHFLWVGPLQAAAVIGLLWQEIG-PSCLAG 244

  Fly   320 VGLLLKTVPVQTALSKVTSVLRMRIAERTDARVGIMNELVQGIQVIKMYAWEKPFQAVVAEARRS 384
            :.:|:..:|:||...|:.|..|.:.|..||:|:..|||:|.||::||||||||||..:|.:.||.
Zfish   245 MAVLVFLMPLQTMFGKLFSKYRSKTAALTDSRIRTMNEVVSGIRIIKMYAWEKPFAMLVNDVRRK 309

  Fly   385 EIKQIRYASYLRGFYLSTMVFTERSTLYITLAAAALMGQTITADFVFSAASYYNILQLVAAIWYP 449
            ||.:|..:|||||..:::.....:..|::|.....|:|.|::|..||.|.|.|:.::|...:::|
Zfish   310 EISKIMSSSYLRGLNMASFFTANKIILFVTFTVYVLVGNTMSASRVFVAVSLYSAVRLTVTLFFP 374

  Fly   450 LAVSFGAEALVSLRRIQDFLMLEGREERTQGLTHKRDQEGGDSRAVTIKDINASWDIEKPQKTLQ 514
            .|:...:|:.:|:|||:.||:|:...:....|:.:..:|    .:|.::|:...||......|||
Zfish   375 AAIEKVSESAISIRRIKKFLLLDELVKNHLPLSQEEKKE----PSVEMQDLICYWDKTLDAPTLQ 435

  Fly   515 SINLQIEKGQLCAVIGPVGAGKSSILQLLLGELPVIDGGVFIQGDLSYAAQEPWLFTGSVRNNIL 579
            ::...::.|||.||||||||||||:|..:|||||...|.:.::|:|:||:|:||:|.|::|:|||
Zfish   436 NVCFTVKPGQLLAVIGPVGAGKSSLLSTVLGELPAEKGVIKVKGELTYASQQPWVFPGTIRSNIL 500

  Fly   580 FGEEFDRKRYQEVTRCCALSTDFQQLPNGDKTLVGERGASLSGGQRARISLARAVYKPAQIYLMD 644
            ||:|...:||:.|.|.|||..|.:.||:||.|::|:|||:|||||:||::||||||:.|.|||:|
Zfish   501 FGKELQPQRYERVLRACALKRDMELLPDGDLTVIGDRGATLSGGQKARVNLARAVYQDADIYLLD 565

  Fly   645 DPLSAVDAHVGRHLFDEVIGPRGRLAQLK-ATRILVTHQVHFLSEADVIVIVDQGRILRQGTYQE 708
            ||||||||.|.||||::.:     ...|| ..|||||||:.:|..|:.|:::.:|.::.:|:|.|
Zfish   566 DPLSAVDAEVSRHLFEQCV-----CGILKDKPRILVTHQLQYLKAANQILVLKEGHMVARGSYSE 625

  Fly   709 LINSDLDFARLLERPKEEEEG-ENSRNQTSP----LSVNSLESDDEDIPFIDGVKDGYQQLRKQS 768
            |..|.|||..||::.:|||.| |......||    :|.||                    :|..|
Zfish   626 LQQSGLDFTSLLKKDEEEESGSEKGEAPRSPRSRTVSQNS--------------------VRSHS 670

  Fly   769 SSVHGSKSLDSTQLDDNVDEDDLAEAQASGGISPRVWYEYFHAGSTLLSFSFMVFVMVMSQVVCS 833
            |||...|. ||.||..........|.::.|.|..|::::||.||:.::....::.:.:::|....
Zfish   671 SSVLSVKD-DSDQLPAEPVHTMAEELRSEGNIGIRMYWKYFRAGANVVMLVLLLLLNLLAQTFYI 734

  Fly   834 SSDFFANIW-TQQE-----------HQRSQGEATFSTFECMY--IYGALIIAVVIMTTFRGFLFF 884
            ..|::.:.| |:||           :..|.|..|.......|  ||..|..|.::....|..:.|
Zfish   735 LQDWWLSYWATEQEKLDHNTNNTNTNNTSAGNTTQQLDLNFYLGIYAGLTGATIVFGFMRCLIMF 799

  Fly   885 KICMHASKVLHDRMFACILHATMRFFDTTPSGRILNRFSKDMGAIDELLPRAMMDFIQIALVMFG 949
            ...:.::::||:|||..||...:||||..|.||||||||||:|.:|.|||...:||||:.|.:.|
Zfish   800 NALVSSAEMLHNRMFNSILRTPVRFFDINPIGRILNRFSKDIGHLDSLLPWTFVDFIQVFLQIVG 864

  Fly   950 ILIVIGILNPVLVAAMLVVAVVDVLILKLYLRPSQDLKRLEGICRSPVFSHLSASLTGLAIIRSR 1014
            ::.|...:.|.::..:|.:.:..:.:.:.:||.|:|:||:|...|||||||||:||.||..||:.
Zfish   865 VIAVASSVIPWILIPVLPLLICFLFLRRYFLRTSRDVKRIESTTRSPVFSHLSSSLQGLWTIRAF 929

  Fly  1015 QLQDVVAKEFDLLQDVHSSVWQLTMAVNTTLGLWLDCVSCIFLTSVTFSFIISSETTYSGNVGLA 1079
            :.::...:.||..||:||..|.|.:..:....:.||.:..:|:|...|..::..:|..:|:||||
Zfish   930 KAEERFQQTFDAHQDLHSEAWFLFLTTSRWFAVRLDGMCSVFVTITAFGCLLLKDTMNAGDVGLA 994

  Fly  1080 IAQAMILTGMVQYGVRQVAESLQQMTSVERVLQYTELEQE-PALGEKTPPQQWPTRGQVEFRNMS 1143
            ::.|:.|.||.|:||||.||....|||||||::|||||.| |...:|.|...||.||.:.|..::
Zfish   995 LSYAVTLMGMFQWGVRQSAEVENMMTSVERVVEYTELESEAPWETQKRPSPDWPNRGLITFDRVN 1059

  Fly  1144 CRYDPNGSPVLRNLNLTIEAGWKVGIVGRTGAGKSSLIGALFRLAHIEGEIFIDGIETGTISLEI 1208
            ..|..:|..||:|::.......||||||||||||||||.|||||:..||:|.:||:.|..|.|..
Zfish  1060 FSYSSDGPVVLKNISAMFRPREKVGIVGRTGAGKSSLISALFRLSEPEGKILVDGVLTSEIGLHD 1124

  Fly  1209 LRTRISIIPQDPVLFSATIRYNLDPFERYTDAELWSALEDVELRKAI---PG-LDYMVTERGGNF 1269
            ||.::||||||||||:.|:|.|||||.:::|.:||.|||:|:|:.|:   || |:..:.|.|.||
Zfish  1125 LRQKMSIIPQDPVLFTGTMRKNLDPFNQHSDHDLWKALEEVQLKAAVEELPGKLETELAESGSNF 1189

  Fly  1270 SVGQRQLLCLARAILRNNKVLVLDEATANVDPQTDALIQRTIRIKFKQCTVLTVAHRLHTVMDSD 1334
            |||||||:||||||||.|:||::|||||||||:||.|||:|||.|||:|||||:||||:|::|||
Zfish  1190 SVGQRQLVCLARAILRKNRVLIIDEATANVDPRTDELIQKTIRDKFKECTVLTIAHRLNTIIDSD 1254

  Fly  1335 RIIVMDAGVAVEFDVPYLLLKKSQGHLRQMVEATG-GESEALKKTASDSH 1383
            ||:|:|||...|:|.|::||:...|...:||:.|| .|:.:|.:||..::
Zfish  1255 RILVLDAGRIHEYDAPHVLLQNQSGIFYKMVQQTGKAEATSLLQTAKQAY 1304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5789NP_001247286.1 CFTR_protein 9..1367 CDD:273530 560/1388 (40%)
ABC_membrane 214..441 CDD:294371 97/228 (43%)
ABCC_MRP_domain1 495..699 CDD:213217 105/204 (51%)
ABC_membrane 863..1088 CDD:294371 86/226 (38%)
ABCC_MRP_domain2 1135..1350 CDD:213211 130/218 (60%)
abcc4NP_001007039.2 SunT 11..1289 CDD:331423 559/1388 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51855
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0001028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 1 1.100 - - O PTHR24223
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X771
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.830

Return to query results.
Submit another query.