DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cftr and CG7627

DIOPT Version :10

Sequence 1:NP_651269.1 Gene:Cftr / 42928 FlyBaseID:FBgn0039207 Length:1402 Species:Drosophila melanogaster
Sequence 2:NP_609215.3 Gene:CG7627 / 34148 FlyBaseID:FBgn0032026 Length:1355 Species:Drosophila melanogaster


Alignment Length:1449 Identity:606/1449 - (41%)
Similarity:851/1449 - (58%) Gaps:181/1449 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KNPRQHANIISQLIFAWAIPLLYRGSRRGLNTDDLTQCLKEDRSEQLGDRLEDQWFKELERSHRK 74
            :|||:|.|.||...|.:.:|...:|.:|.|:|.||.:.|||.:||.||::|...|..|||::   
  Fly    11 ENPREHCNFISAACFWYTMPTFIKGRKRTLDTKDLYRALKEHKSETLGNKLCASWELELEKT--- 72

  Fly    75 KQKPHLRNALFRCFLGPTIINGLICFIY-IVIKTLIPAVLAQLLIQFQKTPVAQLRNIDVNDISI 138
            |.||:|..||.|.|.....:.||:.|:. :.::||.|..|.:|:..:                  
  Fly    73 KGKPNLLRALLRVFGWYFALLGLVLFLLELGLRTLQPIFLLKLIAYY------------------ 119

  Fly   139 SDSLNRTARAIPNYVLSQAVANSSGSPGDALFPKSLDKAGPLEPIQPPVEEVDHNATAVRSILDQ 203
                                  :.||..                    :|...:.|..|      
  Fly   120 ----------------------THGSES--------------------IESAYYYAAGV------ 136

  Fly   204 TVEHMWNDMNSLGAVLVLSTLFCCFLLHHVDLRQRLMGARMRIACCSLIYRKTLRLSMKTAGQTP 268
                            :|.:.....::|...|....:|.:||:..||:||||.||||....|.|.
  Fly   137 ----------------ILCSALNVIIMHPYMLGTMHVGLKMRVGMCSMIYRKALRLSKSALGDTT 185

  Fly   269 AGYLINLLSNDVNRLDYGFIFMHWIWIMPLQAMLTCYLIWLNIGIPAIVGVVGLLLKTVPVQTAL 333
            ||:::||:||||.|||...||:|::|:.||:.:...||::..|||.|:.||..:|| .:|:|..|
  Fly   186 AGHVVNLMSNDVGRLDLATIFVHYLWVGPLETLFITYLMYREIGIAAVFGVAFMLL-FIPLQAYL 249

  Fly   334 SKVTSVLRMRIAERTDARVGIMNELVQGIQVIKMYAWEKPFQAVVAEARRSEIKQIRYASYLRGF 398
            .|.|||||:|.|.|||.||.:|||::.|||||||||||.||:.:||.||:.||..||:.||:||.
  Fly   250 GKRTSVLRLRTALRTDERVRMMNEIISGIQVIKMYAWELPFEHMVAFARKKEINAIRHVSYIRGI 314

  Fly   399 YLSTMVFTERSTLYITLAAAALMGQTITADFVFSAASYYNILQLVAAIWYPLAVSFGAEALVSLR 463
            .||.::|..|.:::::|....|:|..:|.:..|...:|||||:....:::|..:|..||.|||::
  Fly   315 LLSFIIFLTRVSIFLSLVGYVLLGTFLTPEVAFLITAYYNILRTTMTVFFPQGISQMAETLVSIK 379

  Fly   464 RIQDFL---------MLEGREERTQGLTHKRDQEGGDSR-------------------------A 494
            |:|.::         |.....|..||...:.....||..                         .
  Fly   380 RVQKYMQSDETNVMDMSVDLTEDFQGSNQETVHADGDEERDEAEDKLLGPPIATVNENAKLSEAG 444

  Fly   495 VTIKDINASWDIEKPQKTLQSINLQIEKGQLCAVIGPVGAGKSSILQLLLGELPVIDGGVFIQGD 559
            ::|..:.|.||:..|..:|..:||:::.|.:..::|..|:||||::|.:|||||...|.:.:.|.
  Fly   445 ISISGLMAKWDVNSPDYSLNGVNLRVQPGTMLGIVGRTGSGKSSLIQAILGELPAESGEIKVNGS 509

  Fly   560 LSYAAQEPWLFTGSVRNNILFGEEFDRKRYQEVTRCCALSTDFQQLPNGDKTLVGERGASLSGGQ 624
            :|||:||||||:|:||.|||||:..||:||.:|.:.|||..||:.||..|||:||||||||||||
  Fly   510 MSYASQEPWLFSGTVRQNILFGQPMDRRRYAKVVKKCALERDFELLPFKDKTIVGERGASLSGGQ 574

  Fly   625 RARISLARAVYKPAQIYLMDDPLSAVDAHVGRHLFDEVIGPRGRLAQLKATRILVTHQVHFLSEA 689
            :||||||||||:...|||:||||||||.||.||||::.:  ||.|.:  ...||.|||:.||..|
  Fly   575 KARISLARAVYRETSIYLLDDPLSAVDTHVARHLFEQCM--RGYLRE--RIVILATHQLQFLQHA 635

  Fly   690 DVIVIVDQGRILRQGTYQELINSDLDFARLLERPKEEEEGENSRNQTSPLSVNSLESDDEDIPFI 754
            |.|||:|:||:...|||:.|..|.||||.:|..|:.:|:.| .|:::...|.....||       
  Fly   636 DQIVIMDKGRVSAVGTYESLRESGLDFASMLADPERDEQSE-ERSRSRSGSYTHSHSD------- 692

  Fly   755 DGVKDGYQQLRKQSSSVHGSKSLDSTQLDD-NVDEDDLAEAQASGGISPRVWYEYFHAGSTLLSF 818
                    |.|....|:   .|:..:.:|| ..::.:..|.|.:|.|..|::.:||.||....:|
  Fly   693 --------QRRNSEQSL---LSMADSCMDDLEAEQANNQERQEAGQIGLRLYSKYFKAGGGFFAF 746

  Fly   819 SFMVFVMVMSQVVCSSSDFFANIWT-----------QQEHQRSQG-EATFSTF----------EC 861
            ..|:...|:||.:.|..|:|.:.|.           ..:..||:. |...||:          |.
  Fly   747 FVMMGFCVLSQGLASLGDYFLSYWVTKKGNVAYRADNNDTTRSEELEPRLSTWLRDIGLSVDAEM 811

  Fly   862 M--YIYGALIIAVVIMTTFRGFLFFKICMHASKVLHDRMFACILHATMRFFDTTPSGRILNRFSK 924
            :  ||:..:.:..:::|..|.||||.:.|.||..||:.||..|..|.|.||:|.|||||||||||
  Fly   812 LDTYIFTVITVLTILVTVARSFLFFNLAMKASIRLHNSMFRGITRAAMYFFNTNPSGRILNRFSK 876

  Fly   925 DMGAIDELLPRAMMDFIQIALVMFGILIVIGILNPVLVAAMLVVAVVDVLILKLYLRPSQDLKRL 989
            |||.:||:||..|||.|||.|.:.||:|||.::||:.:...:|:.::...:...||:.|:|:||:
  Fly   877 DMGQVDEILPAVMMDVIQIFLALAGIVIVIAVVNPLFLIPTVVLGIIFYQLRTFYLKTSRDVKRM 941

  Fly   990 EGICRSPVFSHLSASLTGLAIIRSRQLQDVVAKEFDLLQDVHSSVWQLTMAVNTTLGLWLDCVSC 1054
            |.|.||||:|||:||||||:.||:...|.|:..|||..||:|||.:.:.::.:...|.||||...
  Fly   942 EAITRSPVYSHLAASLTGLSTIRAFGAQRVLEAEFDNYQDMHSSAFYMFISTSRAFGYWLDCFCV 1006

  Fly  1055 IFLTSVTFSFIISSETTYSGNVGLAIAQAMILTGMVQYGVRQVAESLQQMTSVERVLQYTELEQE 1119
            |::..:|.||.|..... .|:|||||.|||.:|||||:|:||.||....||:||||::|.::|.|
  Fly  1007 IYIAIITLSFFIFPPAN-GGDVGLAITQAMGMTGMVQWGMRQSAELENTMTAVERVVEYEDIEPE 1070

  Fly  1120 PAL---GEKTPPQQWPTRGQVEFRNMSCRY--DPNGSPVLRNLNLTIEAGWKVGIVGRTGAGKSS 1179
            .||   .:|.||:.||.:|::.|..:|.||  ||....||::|:..|:...||||||||||||||
  Fly  1071 GALEAPADKKPPKSWPEQGKIVFDELSLRYTPDPKSENVLKSLSFVIKPKEKVGIVGRTGAGKSS 1135

  Fly  1180 LIGALFRLAHIEGEIFIDGIETGTISLEILRTRISIIPQDPVLFSATIRYNLDPFERYTDAELWS 1244
            ||.|||||::.:|.:.||..:|..:.|..||::||||||:|||||.|:|||||||:.|:|.:||.
  Fly  1136 LINALFRLSYNDGSVLIDKRDTSEMGLHDLRSKISIIPQEPVLFSGTMRYNLDPFDEYSDDKLWR 1200

  Fly  1245 ALEDVELRKAI----PGLDYMVTERGGNFSVGQRQLLCLARAILRNNKVLVLDEATANVDPQTDA 1305
            :||:|:|::.:    .||...:||.|.|||||||||:||||||||.|::||:||||||||||||.
  Fly  1201 SLEEVKLKEVVADLPSGLQSKITEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDG 1265

  Fly  1306 LIQRTIRIKFKQCTVLTVAHRLHTVMDSDRIIVMDAGVAVEFDVPYLLLKKSQGHL-RQMVEATG 1369
            |||.|||.|||:|||||:||||||:||||:::|||||.||||..||.||..:...: ..||:.||
  Fly  1266 LIQTTIRNKFKECTVLTIAHRLHTIMDSDKVLVMDAGRAVEFGTPYELLTLADSKVFHGMVKQTG 1330

  Fly  1370 GES-EALKKTASDSHKRMQ 1387
            ..: |:|.|.|..:.:..|
  Fly  1331 HATYESLLKIAQKAFENRQ 1349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CftrNP_651269.1 MRP_assoc_pro 12..1356 CDD:188098 596/1412 (42%)
CG7627NP_609215.3 PLN03130 13..1348 CDD:215595 604/1444 (42%)

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