DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5789 and abc2

DIOPT Version :9

Sequence 1:NP_001247286.1 Gene:CG5789 / 42928 FlyBaseID:FBgn0039207 Length:1402 Species:Drosophila melanogaster
Sequence 2:NP_593943.3 Gene:abc2 / 2543193 PomBaseID:SPAC3F10.11c Length:1478 Species:Schizosaccharomyces pombe


Alignment Length:1417 Identity:455/1417 - (32%)
Similarity:695/1417 - (49%) Gaps:173/1417 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DSSAKPTRKNPRQHANIISQLIFAWAIPLLYRGSRRGLNTDDLTQCLKEDRSEQLGDRLEDQWFK 66
            ::..:|:|..   :|||.|::.|.|..||:..|.|..|...|.......:||..|....|..|. 
pombe   184 ETGLRPSRFT---YANIFSRISFGWLSPLMKFGYRNYLTESDAWSLPPAERSSNLTIVFEKNWI- 244

  Fly    67 ELERSHRKKQKPHLRNALFRCFLGPTIINGLICFIYIVIKTLIPAVLAQLLIQFQKTPVAQLRNI 131
                ||.||:|..|      ...|...:|.....:.|::..|:..|:|  .||            
pombe   245 ----SHAKKKKSSL------YMWGVLFLNHWKLTVVIIVLKLVQDVVA--FIQ------------ 285

  Fly   132 DVNDISISDSLNRTARAIPNYVLSQAVANSSGSPGDALFPKSLDKAGPLEPIQPPVEEVDHNATA 196
                              ||.:....:..||.|.               |..|||  :|..    
pombe   286 ------------------PNLIRKIVIFVSSYSS---------------EHPQPP--QVGF---- 311

  Fly   197 VRSILDQTVEHMWNDMNSLGAVLVLSTLFCCFLLHHVDLRQRLMGARMRIACCSLIYRKTLRLSM 261
                             ||...:.|:.:....||........::|.|.|....:.||||:||||.
pombe   312 -----------------SLAIAMFLTNVVQTALLQQYFQLGMVLGMRWRSELITAIYRKSLRLSS 359

  Fly   262 KTAGQTPAGYLINLLSNDVNRLDYGFIFMHWIWIMPLQAMLTCYLIWLNIGIPAIVGV-VGLLLK 325
            ........|.::|.:|.|..::....:|:..|...|.|.:|....::..:|..|:.|. |..|| 
pombe   360 AARQSRSVGDIVNYMSVDTQKVCDLTMFLFVIVSGPFQIVLALTNLYHLVGYGALSGAFVTFLL- 423

  Fly   326 TVPVQTALSKVTSVLRMRIAERTDARVGIMNELVQGIQVIKMYAWEKPFQAVVAEARRSE----I 386
             .|....::.:....:.|..:..|||...|.|::..|:.||:||||..|...:.:.|.:.    :
pombe   424 -FPCNVVIASIFKRFQNRQMKNKDARSQFMTEIINNIRSIKLYAWENIFLQKLLQLRNTRELRML 487

  Fly   387 KQIRYASYLRGFYLSTMVFTERSTLYITLAAA------ALMGQT--ITADFVFSAASYYNILQLV 443
            |:|...:.:..|   |.:|..     |.::||      .|.|:|  ::.|.||:..|.:|:||..
pombe   488 KKIGIVNTIGNF---TWLFAP-----ILVSAATFGTFIVLYGKTRVLSVDIVFACLSLFNLLQFP 544

  Fly   444 AAIWYPLAVSFGAEALVSLRRIQDFLML-EGREERTQGLTHKRDQEGGDSRAVTIKDINASWD-- 505
            ..: .|:.||...||.|::.||..||.. |......|.....::..|   ..:.||....||.  
pombe   545 LTM-LPIVVSSVLEASVAISRIYGFLTAGELDSNAVQRYPANKEPSG---VCLEIKKGTFSWSGP 605

  Fly   506 -IEKPQKTLQSINLQIEKGQLCAVIGPVGAGKSSILQLLLGELPVIDGGVFIQGDLSYAAQEPWL 569
             ....:.||:.|:....:|:||.::|.||.||||:|:..||.:....|.||..|.::||||:||:
pombe   606 GQNAAEPTLRDIDFVARRGELCCIVGKVGMGKSSLLEACLGNMQKHSGSVFRCGSIAYAAQQPWI 670

  Fly   570 FTGSVRNNILFGEEFDRKRYQEVTRCCALSTDFQQLPNGDKTLVGERGASLSGGQRARISLARAV 634
            ...:::.|||||.|.|.:.|::..|.|.|..||:.|.:||:|.|||:|.||||||:|||||||||
pombe   671 LNATIQENILFGLELDPEFYEKTIRACCLLRDFEILADGDQTEVGEKGISLSGGQKARISLARAV 735

  Fly   635 YKPAQIYLMDDPLSAVDAHVGRHLFDEVIGPRGRLAQLKATRILVTHQVHFLSEADVIVIVDQGR 699
            |..:.|||:||.|||||.||.|.|...::|.:|.|.  ....||.|:.:..|.||.:|.::..|:
pombe   736 YSRSDIYLLDDILSAVDQHVNRDLVRNLLGSKGLLR--SRCVILSTNSLTVLKEASMIYMLRNGK 798

  Fly   700 ILRQGTYQELINS-DLDFARLLERPKEEEEGEN-------SRNQ---TSPLSVNSLESDDEDI-- 751
            |:..|::.:|.:| |....:||....:::...:       ||:|   ||...|.|..|...|.  
pombe   799 IIESGSFTQLSSSPDSQLFQLLSEFSKKDTASSTGADTPLSRSQSVITSSTDVTSSASRSSDTVS 863

  Fly   752 PFIDGVKDGYQQLRKQSSSVHGSKSLDSTQLDDNVD-EDDLAEAQASGGISPRVWYEYFHAGSTL 815
            .:......|..::||:.:.            :|||. ....||....|.:..:|::.||.|.|..
pombe   864 NYPKATIKGTGRIRKRLTD------------EDNVKATGQAAEKMERGKVKWKVYWTYFKACSLF 916

  Fly   816 LSFSFMVFVM--VMSQVVCSSSDFFANIWTQQEHQRSQGEATFSTFECMYIYGALIIAVVIMT-- 876
            |.|.:.:|::  :...|   .::.:...|::...|.......:.......::|.|..|::.::  
pombe   917 LIFLYFLFIIGGIGMNV---GTNVWLKHWSEVNTQLGYNPKPYFYLGIYTLFGLLSCALISLSSL 978

  Fly   877 TFRGFLFFKICMHASKVLHDRMFACILHATMRFFDTTPSGRILNRFSKDMGAIDELLPRAMMDFI 941
            |...|...|.|    :.|||.|...:|.|.|.||:|||:||||||||.|:..:||::.|..|.|.
pombe   979 TITVFCAIKSC----RYLHDSMVKAVLRAPMSFFETTPTGRILNRFSSDVYRVDEVISRVFMFFF 1039

  Fly   942 QIALVMFGILIVIGILNPVLVAAMLVVAVVDVLIL-----KLYLRPSQDLKRLEGICRSPVFSHL 1001
            :....:..:|.||...:|     |.::.:|.:..|     ..|.:.|::||||:.:.|||:::|.
pombe  1040 RNLFQIVFVLAVICYSSP-----MFMILIVPLFFLYRYNQVYYTQTSRELKRLDSVTRSPLYAHF 1099

  Fly  1002 SASLTGLAIIRSRQLQDVVAKEFDLLQDVHSSVWQLTMAVNTTLGLWLDCVSCIFLTSVTFSFII 1066
            ..||.||:.||:..::|....|.|:..|.:..:|.|..:.|....:.::.:..:.:.|..|..::
pombe  1100 QESLGGLSTIRAYDMEDTFISENDIRVDTNHRIWFLYFSSNRWQAIRVEAIGALVVFSSAFFGVL 1164

  Fly  1067 SS--ETTYSGNVGLAIAQAMILTGMVQYGVRQVAESLQQMTSVERVLQYTELEQE-PA-LGEKTP 1127
            |:  ....||.|||:::.|:.:|..:.:.|||..:....:.||||:|:|..|..| |: :.:..|
pombe  1165 SAVRGNPNSGLVGLSLSYAVQITQSLTFVVRQSVDVETNIVSVERMLEYIGLPSEAPSIIPDHRP 1229

  Fly  1128 PQQWPTRGQVEFRNMSCRYDPNGSPVLRNLNLTIEAGWKVGIVGRTGAGKSSLIGALFRLAH-IE 1191
            |:.||:.|.::|.:.|.||..|...||.::::.|:...|:|||||||||||:|..|||||.. ..
pombe  1230 PEGWPSHGAIKFDHYSVRYRENLPLVLNDISVNIKPQEKIGIVGRTGAGKSTLTLALFRLIEPTS 1294

  Fly  1192 GEIFIDGIETGTISLEILRTRISIIPQDPVLFSATIRYNLDPFERYTDAELWSALEDVELRKAIP 1256
            |:|.:|.|...:|.|..||:|::||||:...|..|||.||||....||.|:|.|||...|::.|.
pombe  1295 GDIQLDDINITSIGLHDLRSRLAIIPQENQAFEGTIRENLDPNANATDEEIWHALEAASLKQFIQ 1359

  Fly  1257 GLD----YMVTERGGNFSVGQRQLLCLARAILRNNKVLVLDEATANVDPQTDALIQRTIRIKFKQ 1317
            .||    ..|||.|.|.|.|||||:||.||:|...:||:||||||.||.:|||::|||||.:|..
pombe  1360 TLDGGLYSRVTEGGANLSSGQRQLMCLTRALLTPTRVLLLDEATAAVDVETDAIVQRTIRERFND 1424

  Fly  1318 CTVLTVAHRLHTVMDSDRIIVMDAGVAVEFDVPYLLLKKSQGHLRQMVEATG 1369
            .|:||:|||::|||||:||:|:|.|..||||....||:........:.:.:|
pombe  1425 RTILTIAHRINTVMDSNRILVLDHGKVVEFDSTKKLLENKASLFYSLAKESG 1476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5789NP_001247286.1 CFTR_protein 9..1367 CDD:273530 453/1406 (32%)
ABC_membrane 214..441 CDD:294371 63/239 (26%)
ABCC_MRP_domain1 495..699 CDD:213217 91/206 (44%)
ABC_membrane 863..1088 CDD:294371 72/233 (31%)
ABCC_MRP_domain2 1135..1350 CDD:213211 114/219 (52%)
abc2NP_593943.3 MRP_assoc_pro 96..1477 CDD:188098 455/1417 (32%)
ABC_membrane 272..545 CDD:279056 80/352 (23%)
ABCC_MRP_domain1 593..798 CDD:213217 91/206 (44%)
ABC_membrane 928..1190 CDD:279056 76/273 (28%)
ABCC_MRP_domain2 1237..1456 CDD:213211 113/218 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51855
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.720

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