Sequence 1: | NP_001247286.1 | Gene: | CG5789 / 42928 | FlyBaseID: | FBgn0039207 | Length: | 1402 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036822.1 | Gene: | Abcb4 / 24891 | RGDID: | 620248 | Length: | 1278 | Species: | Rattus norvegicus |
Alignment Length: | 1357 | Identity: | 305/1357 - (22%) |
---|---|---|---|
Similarity: | 567/1357 - (41%) | Gaps: | 282/1357 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 155 SQAVANSSGSP------GDALFPKSLDKAGPLE-PIQPPVEEVDHNATAVRSILDQTVEHMWNDM 212
Fly 213 NSLGAVLVLS--------TLFCCFLLHHVDLRQRLMGARMRIACCSLIYRKTLRLSMKTAGQTPA 269
Fly 270 GYLINLLSNDVNRLDYGFIFMHWIWIMPLQAMLTCYLI-----W-LNIGIPAIVGVVGLLLKTVP 328
Fly 329 VQTAL-SKVTSVLRMRIAERTD------ARVG-IMNELVQGIQVIKMYAWE----KPFQAVVAEA 381
Fly 382 RRSEIKQ-------------IRYASYLRGF-YLSTMVFTERSTLYITLAAAALMGQTITADFVFS 432
Fly 433 AASYYNILQLVAAI-WYPLAVSFGAEALVSLRRIQDFLMLEGREERTQGLTHKRDQEGGDSRAVT 496
Fly 497 IKDINASWDIEKPQKTLQSINLQIEKGQLCAVIGPVGAGKSSILQLLLGELPVIDGGVFIQGD-- 559
Fly 560 -----------LSYAAQEPWLFTGSVRNNILFG------EEFDRKRYQEVTRCCALSTDF-QQLP 606
Fly 607 NGDKTLVGERGASLSGGQRARISLARAVYKPAQIYLMDDPLSAVD----AHVGRHLFDEVIGPRG 667
Fly 668 RLAQLKATRILVTHQVHFLSEADVIVIVDQGRILRQGTYQELINSDLDFARLLERPKEEEEGENS 732
Fly 733 RNQTSPLSVNSLESDDEDIPFIDGVKDGYQQLR---------KQSSSVHGSK-SLDSTQLDDNVD 787
Fly 788 EDDLAE------------------AQASGGISPRVWYEYFHAGSTLLSFSFMVFVMVMSQVVCSS 834
Fly 835 SDFFANIWTQQEHQRSQGEATFSTFEC-MYIYGALIIAVVIMTTF--RGFLFFKICMHASKVLHD 896
Fly 897 RM----FACILHATMRFFD--TTPSGRILNRFSKDMGAIDELLPRAMMDFIQIALVM-----FGI 950
Fly 951 LIVIGI-----LNPVLVAAMLVVAVVDVLILKLYL-RPSQDLKRLE--GICRSPVFSHLSASLTG 1007
Fly 1008 LAIIRSRQLQDVVAKEF-----DLLQDVHSSVWQLTMAVNTTLGLWLDCVSCIFLTSVTFSFIIS 1067
Fly 1068 SETTYSGNV---GLAIAQAMILTGMVQYGVRQVAESLQQMTSVERVLQYTELEQEPALGEKTPPQ 1129
Fly 1130 QWPTR--GQVEFRNMSCRYDPNGS-PVLRNLNLTIEAGWKVGIVGRTGAGKSSLIGALFRLAH-I 1190
Fly 1191 EGEIFIDGIETGTISLEILRTRISIIPQDPVLFSATIRYNL---DPFERYTDAELWSALEDVELR 1252
Fly 1253 KAIPGL----DYMVTERGGNFSVGQRQLLCLARAILRNNKVLVLDEATANVDPQTDALIQRTIRI 1313
Fly 1314 KFKQCTVLTVAHRLHTVMDSDRIIVMDAGVAVEFDVPYLLLKKSQGHLRQMVEATGG 1370 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG5789 | NP_001247286.1 | CFTR_protein | 9..1367 | CDD:273530 | 304/1352 (22%) |
ABC_membrane | 214..441 | CDD:294371 | 47/266 (18%) | ||
ABCC_MRP_domain1 | 495..699 | CDD:213217 | 72/227 (32%) | ||
ABC_membrane | 863..1088 | CDD:294371 | 42/253 (17%) | ||
ABCC_MRP_domain2 | 1135..1350 | CDD:213211 | 67/223 (30%) | ||
Abcb4 | NP_036822.1 | PTZ00265 | 29..1271 | CDD:240339 | 304/1352 (22%) |
ABC_membrane | 58..342 | CDD:279056 | 60/328 (18%) | ||
ABC_MTABC3_MDL1_MDL2 | 392..628 | CDD:213216 | 82/260 (32%) | ||
Interaction with HAX1. /evidence=ECO:0000269|PubMed:15159385 | 622..646 | 5/33 (15%) | |||
ABC_membrane | 714..984 | CDD:279056 | 56/328 (17%) | ||
ABC_MTABC3_MDL1_MDL2 | 1033..1272 | CDD:213216 | 71/239 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |