DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5789 and Abcc1

DIOPT Version :9

Sequence 1:NP_001247286.1 Gene:CG5789 / 42928 FlyBaseID:FBgn0039207 Length:1402 Species:Drosophila melanogaster
Sequence 2:NP_071617.2 Gene:Abcc1 / 24565 RGDID:3112 Length:1532 Species:Rattus norvegicus


Alignment Length:1452 Identity:476/1452 - (32%)
Similarity:732/1452 - (50%) Gaps:224/1452 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PRQHANIISQLIFAWAIPLLYRGSRRGLNTDDLTQCLKEDRSEQLGDRLEDQWFKE--------- 67
            |...|:.:|::.|.|...::.:|.|:.|.:.||....|||.||::...|.:.|.||         
  Rat   209 PESSASFLSRITFWWITGMMVQGYRQPLKSSDLWSLNKEDTSEEVVPVLVNNWKKECVKSRKQPV 273

  Fly    68 ----------------------------LERSHRKKQKPHLRNALFRCFLGPTIINGLICFIYIV 104
                                        :.:|..|.:.|.|...|::.| ||..   |:.|:|..
  Rat   274 RIVYAPPKDPTKPKGSSQLDVNEEVEALIVKSSHKDRDPSLFKVLYKTF-GPYF---LMSFLYKA 334

  Fly   105 IKTLI----PAVLAQLLIQFQKTPVAQLRNIDVNDISISDSLNRTARAIPNYVLSQAVANSSGSP 165
            :..|:    |.:| :|:|.|            |||        |.|.....|:.:          
  Rat   335 LHDLMMFAGPEIL-ELIINF------------VND--------REAPDWQGYLYT---------- 368

  Fly   166 GDALFPKSLDKAGPLEPIQPPVEEVDHNATAVRSILDQTVEHMWNDMNSLGAVLVLSTLFCCFLL 230
                                                               |:|.:|.......|
  Rat   369 ---------------------------------------------------ALLFVSACLQTLAL 382

  Fly   231 H---HVDLRQRLMGARMRIACCSLIYRKTLRLSMKTAGQTPAGYLINLLSNDVNRLDYGFIFMHW 292
            |   |:..   :.|.|::.|....:|||.|.::......:..|.::||:|.|..|......:::.
  Rat   383 HQYFHICF---VTGMRIKTAVVGAVYRKALVITNSARKSSTVGEIVNLMSVDAQRFMDLATYINM 444

  Fly   293 IWIMPLQAMLTCYLIWLNIGIPAIVGVVGLLLKTVPVQTALSKVTSVLRMRIAERTDARVGIMNE 357
            ||..|||..|..|.:|||:| |:::..|.:::..||....::..|...::...:..|.|:.:|||
  Rat   445 IWSAPLQVTLALYFLWLNLG-PSVLAGVAVMILMVPFNAVMAMKTKTYQVAHMKSKDNRIKLMNE 508

  Fly   358 LVQGIQVIKMYAWEKPFQAVVAEARRSEIKQIRYASYLRGFYLSTMVFTERSTLYITLAAAALMG 422
            ::.||:|:|:||||..||..|...|:.|:|.::.::||......|.|.|.......|.|....:.
  Rat   509 ILNGIKVLKLYAWELAFQDKVMNIRQEELKVLKKSAYLAAVGTFTWVCTPFLVALSTFAVFVTVD 573

  Fly   423 Q--TITADFVFSAASYYNILQLVAAIWYPLAVSFGAEALVSLRRIQDFLMLEGREERTQGLTHKR 485
            :  .:.|...|.:.:.:|||:....| .|:.:|...:|.|||:|::.||..|  |.....:....
  Rat   574 EKNILDAKKAFVSLALFNILRFPLNI-LPMVISSIVQASVSLKRLRIFLSHE--ELEPDSIERWS 635

  Fly   486 DQEGGDSRAVTIKDINASWDIEKPQKTLQSINLQIEKGQLCAVIGPVGAGKSSILQLLLGELPVI 550
            .::||...::|:|:...:|..::| .||..|...|..|.|.||:|.||.||||:|..||.|:..:
  Rat   636 IKDGGGMNSITVKNATFTWARDEP-PTLNGITFAIPDGALVAVVGQVGCGKSSLLSALLAEMDKV 699

  Fly   551 DGGVFIQGDLSYAAQEPWLFTGSVRNNILFGEEFDRKRYQEVTRCCALSTDFQQLPNGDKTLVGE 615
            :|.|.::|.::|..|:.|:...|:|.|||||.......|:.|...|||..|.:.||:||.|.:||
  Rat   700 EGHVTLKGSVAYVPQQAWIQNDSLRENILFGRPLQEHCYKAVMEACALLPDLEILPSGDLTEIGE 764

  Fly   616 RGASLSGGQRARISLARAVYKPAQIYLMDDPLSAVDAHVGRHLFDEVIGPRGRLAQLKATRILVT 680
            :|.:|||||:.|:|||||||..:.|||:||||||||||||:|:|::|:||.|.|.  ..||||||
  Rat   765 KGVNLSGGQKQRVSLARAVYCNSDIYLLDDPLSAVDAHVGKHIFEKVVGPMGLLK--NKTRILVT 827

  Fly   681 HQVHFLSEADVIVIVDQGRILRQGTYQELINSDLDFARLLERPKEEEEGENSRNQTSPLSVNSLE 745
            |.:.:|.:.|||:::..|:|...|:||||::.|..||..                     |.:..
  Rat   828 HGISYLPQVDVIIVMSGGKISEMGSYQELLDRDGAFAEF---------------------VRTYA 871

  Fly   746 SDDEDIPFIDGVKDGYQQLRKQSSSV----------------HGSKSLDSTQLDDNVDEDDLAEA 794
            :.::|:...|..|:|...|.|:|..|                |.|.| .|..:..|......||.
  Rat   872 NTEQDLASEDDSKNGVSGLGKESKPVENGILVTDAVGKPLQRHLSNS-SSHSVVTNQQHSSTAEL 935

  Fly   795 QAS-----------------GGISPRVWYEYFHAGSTLLSFSFMVFVMVMSQVVCSSSDFFANIW 842
            |.|                 |.:...|::.|..|....:|| ..:|:.:.:.|...:|:::.::|
  Rat   936 QKSGVKEETWKLMEADKAQTGQVKLSVYWNYMKAIGLCISF-LSIFLFLCNHVSALASNYWLSLW 999

  Fly   843 TQQEHQRSQGEATFSTFECMYIYGALIIAVVIMTTFRGFLFFKICM-------HASKVLHDRMFA 900
            | .:.....|......|. :.:||||.|       .:|...|...|       .||:.||..:..
  Rat  1000 T-DDRPAVNGTQENRNFR-LSVYGALGI-------LQGVAVFGYSMAVSIGGIFASRRLHLDLLQ 1055

  Fly   901 CILHATMRFFDTTPSGRILNRFSKDMGAIDELLPRAMMDFIQIALVMFGILIVIGILNPVLVAAM 965
            .:|.:.|.||:.||||.::|||||::..:|.::|:.:..|:.....:.|.:|:|.:..|:....:
  Rat  1056 NVLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPQVIKMFMGSLFSVIGAVIIILLATPIAAVII 1120

  Fly   966 LVVAVVDVLILKLYLRPSQDLKRLEGICRSPVFSHLSASLTGLAIIRSRQLQDVVAKEFDLLQDV 1030
            ..:.:|...:.:.|:..|:.|||||.:.||||:||.:.:|.|:::||:.:.|:...::.||..|.
  Rat  1121 PPLGLVYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIRQSDLKVDE 1185

  Fly  1031 HSSVWQLTMAVNTTLGLWLDCV-SCIFLTSVTFSFIISSETTYSGNVGLAIAQAMILTGMVQYGV 1094
            :...:..::..|..|.:.|:|| :||.|.:..|: :||..:..:|.|||:::.::.:|..:.:.|
  Rat  1186 NQKAYYPSIVANRWLAVRLECVGNCIVLFAALFA-VISRHSLSAGLVGLSVSYSLQITAYLNWLV 1249

  Fly  1095 RQVAESLQQMTSVERVLQYTELEQEPA--LGEKTPPQQWPTRGQVEFRNMSCRYDPNGSPVLRNL 1157
            |..:|....:.:|||:.:|:|.|:|.:  :.|..||..||..|:||||:...||..:...||:::
  Rat  1250 RMSSEMETNIVAVERLKEYSETEKEASWQIQETAPPSTWPHSGRVEFRDYCLRYREDLDLVLKHI 1314

  Fly  1158 NLTIEAGWKVGIVGRTGAGKSSLIGALFRL-AHIEGEIFIDGIETGTISLEILRTRISIIPQDPV 1221
            |:|||.|.|||||||||||||||...|||: ...||||.||||....|.|..||.:|:|||||||
  Rat  1315 NVTIEGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGINIAKIGLHNLRFKITIIPQDPV 1379

  Fly  1222 LFSATIRYNLDPFERYTDAELWSALEDVELR---KAIPG-LDYMVTERGGNFSVGQRQLLCLARA 1282
            |||.::|.|||||.:|:|.|:|.|||...|:   .|:|. |::...|.|.|.|||||||:|||||
  Rat  1380 LFSGSLRMNLDPFSQYSDEEVWMALELAHLKGFVSALPDKLNHECAEGGENLSVGQRQLVCLARA 1444

  Fly  1283 ILRNNKVLVLDEATANVDPQTDALIQRTIRIKFKQCTVLTVAHRLHTVMDSDRIIVMDAGVAVEF 1347
            :||..|:||||||||.||.:||.|||.|||.:|:..||||:||||:|:||..|:||:|.|...|.
  Rat  1445 LLRKTKILVLDEATAAVDLETDDLIQSTIRTQFEDSTVLTIAHRLNTIMDYTRVIVLDKGEIREC 1509

  Fly  1348 DVPYLLLKKSQGHLRQMVEATG 1369
            ..|..||:: :|....|.:..|
  Rat  1510 GAPSELLQQ-RGVFYSMAKDAG 1530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5789NP_001247286.1 CFTR_protein 9..1367 CDD:273530 475/1448 (33%)
ABC_membrane 214..441 CDD:294371 65/231 (28%)
ABCC_MRP_domain1 495..699 CDD:213217 96/203 (47%)
ABC_membrane 863..1088 CDD:294371 69/232 (30%)
ABCC_MRP_domain2 1135..1350 CDD:213211 126/219 (58%)
Abcc1NP_071617.2 MRP_assoc_pro 7..1531 CDD:188098 476/1452 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51855
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.730

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