Sequence 1: | NP_001247286.1 | Gene: | CG5789 / 42928 | FlyBaseID: | FBgn0039207 | Length: | 1402 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006236159.1 | Gene: | Cftr / 24255 | RGDID: | 2332 | Length: | 1530 | Species: | Rattus norvegicus |
Alignment Length: | 1593 | Identity: | 439/1593 - (27%) |
---|---|---|---|
Similarity: | 735/1593 - (46%) | Gaps: | 320/1593 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 RKNPRQHANIISQLIFAWAIPLLYRGSRRGLNTDDLTQCLKEDRSEQLGDRLEDQWFKELERSHR 73
Fly 74 KKQKPHLRNALFRCFLGPTIINGLICFIYIVIKTLIPAVLAQLLIQFQKTPVAQLRNIDVNDISI 138
Fly 139 SDSLNRTARAIPNYVLSQAVANSSGSPGDALFPKSLDKAGPLEPIQPPVEEVDHNATAVRSILDQ 203
Fly 204 TVEHMWNDMNSLGAVL--VLSTLF---CCFLLHHVDLRQRLMGARMRIACCSLIYRKTLRLSMKT 263
Fly 264 AGQTPAGYLINLLSNDVNRLDYGFIFMHWIWIMPLQAMLTCYLIWLNIGIPAIVGVVGLLLKTVP 328
Fly 329 VQTALSKVTSVLRMRIAERTDARVGIMNELVQGIQVIKMYAWEKPFQAVVAEARRSEIKQIRYAS 393
Fly 394 YLRGFYLSTMVFTERSTLYITLAAAALMGQTITADFVFSAASYYNILQLVAAIWYPLAVSFGAEA 458
Fly 459 LVSLRRIQDFLMLEGREERTQGLTHKRDQEGGDSRAVTIKDINASWD------IEKPQ------K 511
Fly 512 T-------------------LQSINLQIEKGQLCAVIGPVGAGKSSILQLLLGELPVIDGGVFIQ 557
Fly 558 GDLSYAAQEPWLFTGSVRNNILFGEEFDRKRYQEVTRCCALSTDFQQLPNGDKTLVGERGASLSG 622
Fly 623 GQRARISLARAVYKPAQIYLMDDPLSAVDAHVGRHLFDEVIGPRGRLAQLKA--TRILVTHQVHF 685
Fly 686 LSEADVIVIVDQGRILRQGTYQELINSDLDFARLL------------------------------ 720
Fly 721 ----ERPKEE-----EEGENSRN---------------QTSPLSVNSLESDD---EDIPFIDGVK 758
Fly 759 DGYQQL---------------RKQS---------SSVHGS------------------------- 774
Fly 775 ---KSLDST-QLDDNVDEDDLAEAQASGGIS-PRV--WYEY-----FHAGSTLLSFSFMVFVMVM 827
Fly 828 SQVVCSSSDFFANIWTQQEHQRSQGE--------------ATFSTFECMYIYGALIIAVVIMTTF 878
Fly 879 RGFLFFKICMHASKVLHDRMFACILHATMRFFDTTPSGRILNRFSKDMGAIDELLPRAMMDFIQI 943
Fly 944 ALVMFGILIVIGILNPVLVAAMLVVAVVDVLILKLYLRPSQDLKRLEGICRSPVFSHLSASLTGL 1008
Fly 1009 AIIRSRQLQDVVAKEFDLLQDVHSSVWQLTMAVNTTLGLWLDCVSCIFLTSVTFSFIISSETTYS 1073
Fly 1074 GNVGLAIAQAMILTGMVQYGVRQVAESLQQMTSVERVLQYTELEQEPAL---------GEKTPP- 1128
Fly 1129 -----------QQWPTRGQVEFRNMSCRYDPNGSPVLRNLNLTIEAGWKVGIVGRTGAGKSSLIG 1182
Fly 1183 ALFRLAHIEGEIFIDGIETGTISLEILRTRISIIPQDPVLFSATIRYNLDPFERYTDAELWSALE 1247
Fly 1248 DVELRKAI---PG-LDYMVTERGGNFSVGQRQLLCLARAILRNNKVLVLDEATANVDPQTDALIQ 1308
Fly 1309 RTIRIKFKQCTVLTVAHRLHTVMDSDRIIVMDAGVAVEFDVPYLLLKKSQGHLRQMVEATGGESE 1373
Fly 1374 ALKKTASDSHKRMQRERDE----RDRDQDESQE 1402 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG5789 | NP_001247286.1 | CFTR_protein | 9..1367 | CDD:273530 | 430/1552 (28%) |
ABC_membrane | 214..441 | CDD:294371 | 72/231 (31%) | ||
ABCC_MRP_domain1 | 495..699 | CDD:213217 | 86/236 (36%) | ||
ABC_membrane | 863..1088 | CDD:294371 | 75/224 (33%) | ||
ABCC_MRP_domain2 | 1135..1350 | CDD:213211 | 79/218 (36%) | ||
Cftr | XP_006236159.1 | CFTR_protein | 55..1518 | CDD:273530 | 436/1582 (28%) |
ABC_membrane | 139..357 | CDD:294371 | 76/304 (25%) | ||
ABCC_CFTR1 | 444..724 | CDD:213258 | 94/285 (33%) | ||
CFTR_R | 693..898 | CDD:291094 | 36/205 (18%) | ||
ABC_membrane | 915..1196 | CDD:279056 | 82/283 (29%) | ||
P-loop_NTPase | 1258..1518 | CDD:304359 | 88/265 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D138195at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24223 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.020 |