DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5789 and pgp-5

DIOPT Version :9

Sequence 1:NP_001247286.1 Gene:CG5789 / 42928 FlyBaseID:FBgn0039207 Length:1402 Species:Drosophila melanogaster
Sequence 2:NP_001257116.1 Gene:pgp-5 / 181276 WormBaseID:WBGene00003999 Length:1252 Species:Caenorhabditis elegans


Alignment Length:1060 Identity:252/1060 - (23%)
Similarity:455/1060 - (42%) Gaps:221/1060 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   411 LYITLAAAALMGQTITADFVFSAASYYNILQLVAAIWYPLAVSFGAEALVSLRRIQDFLMLEGRE 475
            ||..|..:..:|:.|           .:|.:|.:||  ||.|.. |:.|:......|....|..:
 Worm   317 LYYILFGSYCLGEAI-----------LHISRLASAI--PLTVPI-ADILLDSDATADEFFSEEIK 367

  Fly   476 ERTQGLTHKRDQEGGDSRAVTIKDINASWDIEKPQKTLQSINLQIEKGQLCAVIGPVGAGKSSIL 540
            :..||:             ::.|::..|:........|:.|:..::.|:..|::|..|:|||:::
 Worm   368 DTFQGI-------------ISFKNVLFSYPTRPDVPVLKEISFNVQGGECIALVGASGSGKSTVI 419

  Fly   541 QLLLGELPVIDGGVFIQGD-------------LSYAAQEPWLFTGSVRNNILFGEEFDRKRYQEV 592
            ||||....:..|.:.|.|:             :....|||.||..|:..||.||:....:  ||:
 Worm   420 QLLLHYYNIDSGRISIDGNDIYNINIKQLRQAMGVVFQEPVLFNTSIEENIRFGKPDATE--QEI 482

  Fly   593 TRCCALSTDFQ---QLPNGDKTLVGERGASLSGGQRARISLARAVYKPAQIYLMDDPLSAVDAHV 654
            ......:..|.   ..|:|.||:||||||.|||||:.||::||.:.:..:|.|:|:..||:| :.
 Worm   483 IDALKNANAFDFVCNFPDGIKTIVGERGAQLSGGQKQRIAIARTLVRNPRILLLDEATSALD-NE 546

  Fly   655 GRHLFDEVIGPRGRLAQLKATRILVTHQVHFLSEADVIVIVDQGRILRQGTYQELINSDLDFARL 719
            ...:..|.:    :.|.:..|.|:|.|::..:..|:.|:::::|.|:..|.:::||..:..:..|
 Worm   547 SEFIVQEAL----QKASIGRTTIVVAHRLSTIRNANKIIVMEKGEIVEVGDHKQLIAMNGVYNNL 607

  Fly   720 LERPKEEEEGENSRNQTSPLSVN--SLESDDEDIPFIDGVKDGYQQLRKQSSSVHGSKSLDSTQL 782
            :              ||..:|.|  .:..::|.:            .|:.|.|...|..:...::
 Worm   608 V--------------QTQLMSTNYEKMNENEERV------------TRQSSHSDFPSNEISHQKI 646

  Fly   783 DDNVDEDD-----LAEAQASGGISPRVW--YEYFHAGSTLLSFSFM------VFVMVMSQVVCSS 834
            |   .|||     :||.:..|.....:.  .:|..:...:|..:.:      ::..:.||::..|
 Worm   647 D---QEDDYVKKLIAEIKEEGAKKSNICEIIKYCRSEYCILFIAVLGSAIQGIYYPLSSQLMIKS 708

  Fly   835 SDFFANIWTQQEHQRSQGEATFSTFECMYIYGALIIAVVIMTT-----FRGFLFFKICMHASKVL 894
            .:.:|   ..::...|:..           :.||.|..:..|.     |:.:.|.|.....|..|
 Worm   709 YEAYA---FDKDEMLSKSH-----------FWALSILFLAFTRPIFIFFQYYFFGKTAEKLSIKL 759

  Fly   895 HDRMFACILHATMRFFDTT--PSGRILNRFSKD----MGAIDELLPRAMMDFIQIALVMFGILIV 953
            ....|..::.....|:|..  .:.|:.||.:.|    ..|:|:.|...:|..:.|.|.     ::
 Worm   760 RSMSFKHLMSLPCAFYDDPCHTATRLSNRLNADSSNVTAAVDDRLGSVIMTLVAILLA-----VI 819

  Fly   954 IGI-------LNPVLVAAMLVVA------VVDVLILKLYLRPSQDLKRLEGICRSPVFSHLSASL 1005
            :..       |..::...:|.:|      .||..:       .:|....|...|:.:     .:|
 Worm   820 MSFFYSWKMSLQVLMFCPLLYLAGYCNDNFVDQAV-------EEDSIAFEKSNRAAI-----EAL 872

  Fly  1006 TGLAIIRSRQLQD-VVAKEFDLLQDVHSSVWQLTMAVNTTLGLWLDCVSCIFLTSVTFSF----- 1064
            ..:..:|:..::: |:......||.:.:|.::..:...|..|....|.  .|:.:|:|.|     
 Worm   873 ENVRTVRALNMENRVILLVTSHLQKIRNSYFKRAVIQGTANGFACSCY--FFIYAVSFKFGTWLV 935

  Fly  1065 ---------------IISSETTYSGNV-------GLAIAQAMILTGMVQYGVRQVAESLQQMTSV 1107
                           .:|...:|:|:.       ..||..|.::..:..|......:|.|...::
 Worm   936 LREEILPMDTYLVLMTLSMTASYAGSAVAYLPDHRKAIHAAGLIFHLFTYPAIMPYDSSQGKRNI 1000

  Fly  1108 ERVLQYTELEQEPALGEKTPPQQWPTRGQVEFRNMSCRY-DPNGSPVLRNLNLTIEAGWKVGIVG 1171
            :                         .|::|.:|:|..| ..:...:|..::|.:.||..:.:||
 Worm  1001 K-------------------------NGEIELKNVSFEYAQRSDKMILDGVSLKLPAGRTLALVG 1040

  Fly  1172 RTGAGKSSLIGALFRLAH-IEGEIFIDGIETGTISLEILRTRISIIPQDPVLFSATIRYNLDPFE 1235
            .:|:|||::|..|.|..| ::||:.||......::|..||..:|::.|:||||:.:|:.|.    
 Worm  1041 PSGSGKSTIISLLERFYHAVDGEVKIDEENVVDVNLHHLRESVSLVSQEPVLFNCSIKENF---- 1101

  Fly  1236 RYTDAELWSALE-DVELRKA--------IP-GLDYMVTERGGNFSVGQRQLLCLARAILRNNKVL 1290
            .:..:...|.|| |..|:.|        .| |||.:|.|||...|.||:|.:.:|||||||.|||
 Worm  1102 LFGISHNASQLEIDQALKVANAFSFVSQFPQGLDTLVGERGAQLSGGQKQRIAIARAILRNPKVL 1166

  Fly  1291 VLDEATANVDPQTDALIQRTIRIKFKQCTVLTVAHRLHTVMDSDRIIVMDAGVAVEFDVPYLLLK 1355
            :|||||:.:|..::.::|..:....::.:.:.|||||.||:::|.|.|:..|...|......||:
 Worm  1167 LLDEATSALDSDSEKVVQNALDTASERLSTVVVAHRLSTVVNADSIAVLKNGKVAEQGTHEELLR 1231

  Fly  1356 KSQGHLRQMVEATGGESEAL 1375
            |...:.| :|:..|.:.|.|
 Worm  1232 KRSIYWR-LVQKQGIQVETL 1250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5789NP_001247286.1 CFTR_protein 9..1367 CDD:273530 249/1050 (24%)
ABC_membrane 214..441 CDD:294371 6/29 (21%)
ABCC_MRP_domain1 495..699 CDD:213217 64/219 (29%)
ABC_membrane 863..1088 CDD:294371 49/276 (18%)
ABCC_MRP_domain2 1135..1350 CDD:213211 81/226 (36%)
pgp-5NP_001257116.1 PTZ00265 27..1241 CDD:240339 248/1049 (24%)
ABC_membrane 41..322 CDD:294371 2/4 (50%)
ABC_MTABC3_MDL1_MDL2 374..611 CDD:213216 71/257 (28%)
ABC_membrane 688..955 CDD:294371 49/299 (16%)
ABC_MTABC3_MDL1_MDL2 1005..1243 CDD:213216 85/242 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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