DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cftr and abcc2

DIOPT Version :10

Sequence 1:NP_651269.1 Gene:Cftr / 42928 FlyBaseID:FBgn0039207 Length:1402 Species:Drosophila melanogaster
Sequence 2:XP_004915926.1 Gene:abcc2 / 100485020 XenbaseID:XB-GENE-1012796 Length:1552 Species:Xenopus tropicalis


Alignment Length:1442 Identity:473/1442 - (32%)
Similarity:772/1442 - (53%) Gaps:171/1442 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TRKNPRQHANIISQLIFAWAIPLLYRGSRRGLNTDDLTQCLKEDRSEQLGDRLEDQW-------F 65
            |::||...|:.:|::.|.|...::.:|.::.|..:||.:..:||:::.:.:..|...       .
 Frog   199 TKENPELTASFLSRITFNWYNSIVVKGYKKPLEMEDLWELNEEDKTKNMYEIFEKHMKHDVRKAK 263

  Fly    66 KELE-RSHRKKQKPHLRNALFRCFLGPTIINGLICFIYIVIKTLIPAVLAQLLIQFQKTPVAQLR 129
            |:|| |.:::|||.                :|      |.:..:..|....:|:..:|....:.:
 Frog   264 KDLEKRKNKRKQKE----------------SG------IEMNGISKAQSQDILVMEEKKKEKKKK 306

  Fly   130 NIDVNDISISDSLNRTARAIPNYVLSQAVANSSGSPGDALFPKSLDKAG-------PLEPIQPPV 187
                     ..|::.||:..|...|.:.:..:        ||.:|..:.       .|..:.|.:
 Frog   307 ---------EKSIDGTAKDYPKRWLIKTLIKT--------FPSTLLTSAIFKLLHDLLAFVSPQI 354

  Fly   188 EEVDHNATAVRSILDQTVEHMWNDMNSLGAVLVLST-LFCCFLLHHVDLRQRLMGARMRIACCSL 251
            .:|....||..|      :|.|...  ..|||:|.| |...|||........::|.|:|....:.
 Frog   355 LKVMVTFTADPS------QHQWQGF--FYAVLLLVTALLQSFLLQQYFHGCFVLGMRVRSLLMAA 411

  Fly   252 IYRKTLRLSMKTAGQTPAGYLINLLSNDVNRLDYGFIFMHWIWIMPLQAMLTCYLIWLNIGIPAI 316
            :|:|.|.:|.....::..|..:||:|.|..|......|:|.:|..|||..::...:|..:| |::
 Frog   412 VYKKALTVSNAIRKESTVGETVNLMSADAQRFMDLTNFIHLLWSSPLQIAISIVFLWEELG-PSV 475

  Fly   317 VGVVGLLLKTVPVQTALSKVTSVLRMRIAERTDARVGIMNELVQGIQVIKMYAWEKPFQAVVAEA 381
            :..:|:::..:|:...|:.|:..|:|:..:..|.|:.||||::.||:::|:||||..|:..|.|.
 Frog   476 LAGLGVMILLIPINAVLATVSRKLQMKNMKNKDKRMKIMNEILNGIKILKLYAWEPSFENQVQEI 540

  Fly   382 RRSEIKQIRYASYLRGFYLSTMVFTERSTLYITLAAAALM-----GQTITADFVFSAASYYNILQ 441
            |..|:|.:.:.:||..  :|..||| .:...:::|..|:.     ...:.|:..|::.|.:|||:
 Frog   541 REKELKDMLHFTYLHS--VSLFVFT-CAPFLVSVATFAVYVAVDPSNVLNAEKAFTSISLFNILR 602

  Fly   442 LVAAIWYPLAVSFGAEALVSLRRIQDFLMLEGREERTQGLTHKRDQEGGDS-------------R 493
            ...|: .|:.:|...:..||..|::.:|                   |||:             .
 Frog   603 FPLAM-LPMLISSMVQTSVSSARLEKYL-------------------GGDNLDTSAIRCDPNIDA 647

  Fly   494 AVTIKDINASWDIEKPQKTLQSINLQIEKGQLCAVIGPVGAGKSSILQLLLGELPVIDGGVFIQG 558
            ||...|...||: |.....:.::||.|::|.|.||:|.||:||||::..:|||:..:.|.:.|:|
 Frog   648 AVQFSDATFSWE-EDANPAVNNVNLDIKEGNLVAVVGGVGSGKSSLVSAMLGEMDHVGGYINIKG 711

  Fly   559 DLSYAAQEPWLFTGSVRNNILFGEEFDRKRYQEVTRCCALSTDFQQLPNGDKTLVGERGASLSGG 623
            .::|..|:.|:...:::||||||.:.|.:|||:|...|||..|.:.||..|::.:||:|.:||||
 Frog   712 SIAYVPQQAWIQNATLKNNILFGSKMDEERYQKVLEACALLPDLEMLPGHDESEIGEKGINLSGG 776

  Fly   624 QRARISLARAVYKPAQIYLMDDPLSAVDAHVGRHLFDEVIGPRGRLAQLKATRILVTHQVHFLSE 688
            |:.|:|||||||..|.||::||||||||||||:|:|::|:||.|.|.  ..|||||||.|.||..
 Frog   777 QKQRVSLARAVYNDADIYILDDPLSAVDAHVGKHIFEKVVGPNGLLK--NKTRILVTHGVSFLKH 839

  Fly   689 ADVIVIVDQGRILRQGTYQELINSDLDFARLLERPKEEEEGENSRNQTSPLSVNSLESDDEDIPF 753
            ||.||::...|:...|:|:.|..::..||..|.  ...::.:.:.|:.:..:....|.|.:.:..
 Frog   840 ADDIVVLVNSRVTETGSYKTLQANNGAFAEFLR--LYAKQNDQTDNEATVFTGEDDEDDGDQVET 902

  Fly   754 IDGVKD----------GYQQLRKQSSSVHGS--KSL-DSTQLDDNVDEDDL-------AEAQASG 798
            .:.::|          ..:|.::.|.|::|:  :|: |.|:....:..:|.       .|...:|
 Frog   903 AEVIEDIVASTVKRENSMRQRKRSSVSMNGTLRRSVKDVTKKKTGIGSNDTKGQKLIEKETVETG 967

  Fly   799 GISPRVWYEYFHAGSTLLSFSFMVFVMVMSQVVCSSSDFFANIW--------------TQQEHQR 849
            .:..:::.:|..|..  ..|||.:||   |.::.:::....|||              |....||
 Frog   968 KVKFKLYLKYLRAVG--WGFSFWIFV---SYILQNAAFVGQNIWLSDWTGDAEKYYNITYPASQR 1027

  Fly   850 SQGEATFSTFECMYIYGALIIAVVIMTTFRGFLFFKICMHASKVLHDRMFACILHATMRFFDTTP 914
            ...         :.::|||.:|..:......||.....:.||::||.::...||...||||||||
 Frog  1028 DMR---------VGVFGALGVAQALFVLLGAFLVSGGAVRASRMLHTQLLHNILRVPMRFFDTTP 1083

  Fly   915 SGRILNRFSKDMGAIDELLPRAMMDFIQIALVMFGILIVIGILNPVLVAAMLVVAVVDVLILKLY 979
            :|||:|||:||:..:||.:|.:...:|...|.:.|.|.:|.:..|:..|.::.:|:....:.:.|
 Frog  1084 TGRIVNRFAKDILTVDETIPMSFRSWIACFLGVIGTLFIICLATPIFAAVIVPLAIFYYFVQRFY 1148

  Fly   980 LRPSQDLKRLEGICRSPVFSHLSASLTGLAIIRSRQLQD-VVAKEFDLLQDVHSSVWQLTMAVNT 1043
            :..|:.|:||:.:.|||::||...:::||::||:...|| .:....|.:.:...||:...:: |.
 Frog  1149 VTTSRQLRRLDSVTRSPIYSHFGETVSGLSVIRAYGHQDRFLQHNEDTIDNNQKSVYSWIVS-NR 1212

  Fly  1044 TLGLWLDCVSCIFLTSVTFSFIISSETTYSGNVGLAIAQAMILTGMVQYGVRQVAESLQQMTSVE 1108
            .|.:.|:.|..:.:.......::...|..||.|||:|:.|:.:|..:.:.||..:|....:.:||
 Frog  1213 WLAIRLEFVGNLTVFFAALFAVLGRGTVDSGTVGLSISSALNITQTLNWLVRMTSELETNIVAVE 1277

  Fly  1109 RVLQYTELEQEPA-LGEKTPPQQWPTRGQVEFRNMSCRYDPNGSPVLRNLNLTIEAGWKVGIVGR 1172
            ||.:|.::|:|.. :.:..||:.||.:|.|:|.:...||.|....||:.::.||.:..|||||||
 Frog  1278 RVDEYIKVEREAQWVEDHRPPKDWPEKGVVQFVDYKVRYRPELDLVLQGISCTINSMEKVGIVGR 1342

  Fly  1173 TGAGKSSLIGALFRLAHIE---GEIFIDGIETGTISLEILRTRISIIPQDPVLFSATIRYNLDPF 1234
            ||||||||...:||:  ||   |:|.|||::..:|.|..||.:::||||||||||..:|.|||||
 Frog  1343 TGAGKSSLTNCIFRI--IESAGGKIMIDGLDIASIGLHDLRQKLTIIPQDPVLFSGNLRMNLDPF 1405

  Fly  1235 ERYTDAELWSALEDVELRKAIPGLD----YMVTERGGNFSVGQRQLLCLARAILRNNKVLVLDEA 1295
            .:|||.::|.|||...|:..:.||.    :.|:|.|.|.|||||||:|||||:||.:|:|:||||
 Frog  1406 NQYTDEDIWKALELSHLKPFVEGLQEKLFHEVSEGGENLSVGQRQLVCLARALLRKSKILILDEA 1470

  Fly  1296 TANVDPQTDALIQRTIRIKFKQCTVLTVAHRLHTVMDSDRIIVMDAGVAVEFDVPYLLLKKSQGH 1360
            ||.||.:||.|||||||.:|..|||||:||||||:|||.|::|:|||..:||..|..||:: |||
 Frog  1471 TAAVDLETDNLIQRTIRSEFADCTVLTIAHRLHTIMDSSRLMVLDAGKIIEFGSPDELLQR-QGH 1534

  Fly  1361 LRQMVEATGGES 1372
            ...|.:..|.:|
 Frog  1535 FFSMAKDAGIDS 1546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CftrNP_651269.1 MRP_assoc_pro 12..1356 CDD:188098 465/1420 (33%)
abcc2XP_004915926.1 MRP_assoc_pro 10..1544 CDD:188098 471/1438 (33%)

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