DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jhbp12 and Jhbp4

DIOPT Version :10

Sequence 1:NP_651265.1 Gene:Jhbp12 / 42924 FlyBaseID:FBgn0039203 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_650518.1 Gene:Jhbp4 / 41948 FlyBaseID:FBgn0038394 Length:270 Species:Drosophila melanogaster


Alignment Length:247 Identity:66/247 - (26%)
Similarity:118/247 - (47%) Gaps:7/247 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SLLLMLLLIAAVAQELT--VTAAQELPEGFPKCKR-DANFDKCLVDAVNVAIQQLKAGNREFGIP 66
            |:.|:.:...|..:|:.  ....||.|.....||| :.|.|||...........|.||..|.|:.
  Fly    19 SICLITVTHGAYTREIVNDKLPLQERPSWLQTCKRSNPNEDKCFRQLFEGCFPALAAGIPEIGVK 83

  Fly    67 PLEPLTVKKLVIDAGNAPINLRQALKNVKVHDMISTSKIQRYRTDLDKHLIICDSRTDRIEMIGD 131
            ..|||.:.::.:..|:..:.|....:::.:... |.:.::|...||::.|:..:....|:.:...
  Fly    84 SFEPLNIDQVSVSKGSGNLVLSGGFQDLVIRGP-SNATVRRASLDLERRLLNFELELPRLRIRAK 147

  Fly   132 YEMSGRILLLPITGHGKANVTL--INTKIEHRLIGEPFEKDGVKYMRLKDYRVSFDPKRVYMNFE 194
            |.:.|.|||||:.|.|...:.|  ::|.:..|:......:.|.:.:.:.:.:|.||...:.::.:
  Fly   148 YNLKGNILLLPLVGSGDVAMALKNVHTTVYTRISLRNETRTGDEIIHIDEMKVGFDVGAMRIHLK 212

  Fly   195 NLFN-DKTLSDGMNRFLNENWETVFNELKVGYAKSFGIIFRELSNKLFEKVP 245
            |||| ::.|:..:|.|||:|.:.|..||:.........||..|.|.:|.|:|
  Fly   213 NLFNGNEILAASINSFLNQNGKEVIAELRPDLELGLADIFHGLWNNVFSKMP 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jhbp12NP_651265.1 JHBP 14..251 CDD:461956 64/238 (27%)
Jhbp4NP_650518.1 JHBP 42..270 CDD:214779 62/224 (28%)

Return to query results.
Submit another query.