DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhbp12 and CG3246

DIOPT Version :10

Sequence 1:NP_651265.1 Gene:Jhbp12 / 42924 FlyBaseID:FBgn0039203 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_608781.2 Gene:CG3246 / 33564 FlyBaseID:FBgn0031538 Length:445 Species:Drosophila melanogaster


Alignment Length:258 Identity:60/258 - (23%)
Similarity:95/258 - (36%) Gaps:78/258 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IAAVAQELTVTAAQELPEGFPKCKRDANFDKCLVDAVNVAIQQLKAGNREFGIPPLEPLTVKKLV 77
            |||..:.:.|...||.|:|.|                              |:|..:||.|..:.
  Fly    49 IAAQVEAMLVHFQQEDPQGLP------------------------------GVPVPDPLEVPNVK 83

  Fly    78 IDAGNAPINLRQALKNVKVHDMISTSKIQRYRTDLDKHLIICDSRTDRIEMIGDYEMSGRILLLP 142
            ...|.|.::::|    ||.:. :|..:|.:...||.:.......:.|::.:.|.|.:|       
  Fly    84 KSMGMANLDMKQ----VKAYG-LSKFRIDKMNLDLKEMRFNGGLQLDQMLVKGQYTLS------- 136

  Fly   143 ITGHGKAN----VTLINTKIEHRLIGEPF---EKDGVKYMRLKDYRVSFDP--KRVYMNFENL-- 196
             :...|||    |.|.|...|    ...|   |:||    :|...|:..|.  ..:.|:|:||  
  Fly   137 -SFFSKANGPFTVVLKNVYAE----ATAFLAVERDG----QLATDRIKIDITFSDMTMDFQNLGL 192

  Fly   197 ----FND------KTLSDGMNRF-LNENWETVFNELKVGYAKSFGIIFRELSNKLFEKVPFDN 248
                |..      ..:.|.|..| |.|..:.:.:|:.|...|:.|  .|.|.|.:   .|.|:
  Fly   193 VGSVFQSVVNGAPNLVFDAMKPFMLQEADKKLRSEINVMIQKTLG--ERRLPNSI---TPLDS 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jhbp12NP_651265.1 JHBP 14..251 CDD:461956 59/257 (23%)
CG3246NP_608781.2 JHBP 31..246 CDD:214779 58/252 (23%)
Grp7_allergen 260..418 CDD:319052
Blue background indicates that the domain is not in the aligned region.

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