DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1alpha-96A and ppef1

DIOPT Version :9

Sequence 1:NP_001262919.1 Gene:Pp1alpha-96A / 42922 FlyBaseID:FBgn0003134 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_021335306.1 Gene:ppef1 / 559132 ZFINID:ZDB-GENE-080303-27 Length:729 Species:Danio rerio


Alignment Length:431 Identity:112/431 - (25%)
Similarity:166/431 - (38%) Gaps:147/431 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IDSIISRLL-EVRGAR------------PGKNVQLSESEIRSL-----------------CLKSR 41
            :||::..|. |||..:            |..:..||.::..:|                 .|...
Zfish    99 LDSVVDPLTEEVRQLKYEQIMVPESYSGPRLSFPLSVTDTNALLSAFKEEQTLHGKYVLQLLYET 163

  Fly    42 EIFLSQ-PILLELEA----PLKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGDYVDRGKQSLE 100
            :.||.| |.::.|..    .:.||||:||:..|||.:|...|.|...| |:|.||:|||||:|.|
Zfish   164 KKFLKQMPNVIYLSTSYAKEITICGDLHGRLDDLLLIFYKNGLPSAENPYIFNGDFVDRGKKSTE 228

  Fly   101 TICLLLAYKIKYAENFFLLRGNHECASINRIYGFYDECKRRYTI---KLWKTFTDCFNCLPVAAI 162
            .|.:|.|:.:.|.::..|.|||||...:|..|||..|..::|..   ::.:...|.|:.||||.:
Zfish   229 IIIILFAFVLLYPDHMHLNRGNHEDHIMNLRYGFTREVMQKYKTHGREILQLLQDVFSLLPVATV 293

  Fly   163 VDEKIFCCHGGL----------------------------------------------------- 174
            :|.|:...|||:                                                     
Zfish   294 IDNKVLIVHGGISDKTDLDFLSTVERHKVKSALRLPKRSTDHLTVRSCSRSSSRNRGRNSRSSSR 358

  Fly   175 -------------------------------SPDLSSMEQIRR------------------IMRP 190
                                           ||.:|:....||                  .:.|
Zfish   359 HSSRSRRKKLSKQGSRSSSSSSSSSSSSSMCSPRVSAKNTPRRPPPSPTDMLQVPFLDSFVSLEP 423

  Fly   191 TDVPDQGL----LCDLLWSDPDKDTMGWGEND-RGVSFTFGAEVVGKFLQKHEFDLICRAHQVVE 250
            .::|.:.|    :.|:||||| |...|...|. ||....||.:|....||||...|:.|:|:..:
Zfish   424 PELPREELEWQQVVDILWSDP-KHQNGCSPNSFRGGGCYFGPDVTQTLLQKHGLCLLIRSHECKQ 487

  Fly   251 DGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDDTLMCSF 291
            :|||.....|::|:|||.||..|..|.||.:.:...|:..|
Zfish   488 EGYELCHNGQVITIFSASNYYEEGSNRGAYVKLGPELVPRF 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1alpha-96ANP_001262919.1 MPP_PP1_PPKL 6..296 CDD:277359 112/431 (26%)
ppef1XP_021335306.1 IQ 32..54 CDD:197470
MPP_RdgC 132..532 CDD:277364 105/398 (26%)
EFh_PEF 567..715 CDD:330173
EF-hand motif 567..600 CDD:320054
EF-hand motif 609..649 CDD:320054
EFh 650..716 CDD:238008
EF-hand motif 650..683 CDD:320054
EF-hand motif 690..719 CDD:320054
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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