DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp1alpha-96A and ppp2ca

DIOPT Version :9

Sequence 1:NP_001262919.1 Gene:Pp1alpha-96A / 42922 FlyBaseID:FBgn0003134 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_989274.1 Gene:ppp2ca / 394888 XenbaseID:XB-GENE-484003 Length:309 Species:Xenopus tropicalis


Alignment Length:295 Identity:139/295 - (47%)
Similarity:197/295 - (66%) Gaps:10/295 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IDSIISRLLEVRGARPGKNVQLSESEIRSLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLL 71
            :|..|.:|.|.:        ||||:::::||.|::||...:..:.|:..|:.:|||:|||::||:
 Frog    10 LDQWIEQLNECK--------QLSENQVKTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLM 66

  Fly    72 RLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYAENFFLLRGNHECASINRIYGFYD 136
            .||..||..|::||||:|||||||..|:||:.||:|.|::|.|...:||||||...|.::|||||
 Frog    67 ELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYD 131

  Fly   137 ECKRRY-TIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLSSMEQIRRIMRPTDVPDQGLLC 200
            ||.|:| ...:||.|||.|:.||:.|:||.:|||.||||||.:.:::.||.:.|..:||.:|.:|
 Frog   132 ECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMC 196

  Fly   201 DLLWSDPDKDTMGWGENDRGVSFTFGAEVVGKFLQKHEFDLICRAHQVVEDGYEFFAKRQLVTLF 265
            |||||||| |..|||.:.||..:|||.::...|...:...|:.||||:|.:||.:...|.:||:|
 Frog   197 DLLWSDPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIF 260

  Fly   266 SAPNYCGEFDNAGAMMSVDDTLMCSFQILKPADKR 300
            ||||||....|..|:|.:||||..||....||.:|
 Frog   261 SAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRR 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1alpha-96ANP_001262919.1 MPP_PP1_PPKL 6..296 CDD:277359 136/289 (47%)
ppp2caNP_989274.1 MPP_PP2A_PP4_PP6 9..293 CDD:277360 137/291 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.