DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1alpha-96A and Ppef1

DIOPT Version :10

Sequence 1:NP_524484.1 Gene:Pp1alpha-96A / 42922 FlyBaseID:FBgn0003134 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001421152.1 Gene:Ppef1 / 317498 RGDID:1562772 Length:664 Species:Rattus norvegicus


Alignment Length:287 Identity:90/287 - (31%)
Similarity:140/287 - (48%) Gaps:40/287 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 IRSLCLKSREIFLSQPILLELEA-PLK---ICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGDYV 92
            :..:..::|:|....|....::. |.|   ||||:||:..||:.:|...|.|.|.| |:|.||:|
  Rat   164 VLEVLFEARKILKQMPNFTRIQTFPAKEITICGDLHGKLDDLMLIFYKNGLPSEKNPYVFNGDFV 228

  Fly    93 DRGKQSLETICLLLAYKIKYAENFFLLRGNHECASINRIYGFYDECKRRYTI---KLWKTFTDCF 154
            |||..|:|.:.:||...:.|..:..|.|||||...:|..|||..|..::|.:   |:.:...:.:
  Rat   229 DRGNNSMEILMILLVSFLVYPTDLHLNRGNHEDFMMNLRYGFTKEILQKYKLHGKKILQVLEELY 293

  Fly   155 NCLPVAAIVDEKIFCCHGGL--SPDLSSMEQIRR------IMRPTDVPDQ--------------- 196
            ..||:..|:|.:|...|||:  |.||:.::|::|      :|.|.....:               
  Rat   294 TWLPIGTIIDNEILVIHGGISESTDLNILQQLQRNKMKSVLMPPMSTNQECNIKKNKAGPSEQSA 358

  Fly   197 ---------GLLCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVGKFLQKHEFDLICRAHQVVEDG 252
                     ..:.|||||||......:....||....||.:|..|.|.|::..::.|:|:...||
  Rat   359 SEQLTKLEWEQIIDLLWSDPRGKKGCYPNTSRGGGCYFGPDVTSKVLNKNQLKMVIRSHECKPDG 423

  Fly   253 YEFFAKRQLVTLFSAPNYCGEFDNAGA 279
            ||.....:::|:|||.||..|..|.||
  Rat   424 YEICHDGKVITVFSASNYYEEGSNRGA 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1alpha-96ANP_524484.1 MPP_PP1_PPKL 6..296 CDD:277359 90/287 (31%)
Ppef1NP_001421152.1 IQ 40..>57 CDD:197470
MPP_RdgC 140..466 CDD:277364 90/287 (31%)
FRQ1 498..660 CDD:444056
Blue background indicates that the domain is not in the aligned region.

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