DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1alpha-96A and pph-4.2

DIOPT Version :9

Sequence 1:NP_001262919.1 Gene:Pp1alpha-96A / 42922 FlyBaseID:FBgn0003134 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001022898.1 Gene:pph-4.2 / 176663 WormBaseID:WBGene00004086 Length:321 Species:Caenorhabditis elegans


Alignment Length:274 Identity:124/274 - (45%)
Similarity:189/274 - (68%) Gaps:4/274 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LSESEIRSLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYV 92
            :.|::::|:|.|.|||.:.:..:..::.|:.||||||||::||:.||..||.||.:|||||||||
 Worm    30 ICETQVKSICAKVREILIEEANVQVIDTPVTICGDIHGQFHDLMELFRVGGSPPNTNYLFLGDYV 94

  Fly    93 DRGKQSLETICLLLAYKIKYAENFFLLRGNHECASINRIYGFYDECKRRY-TIKLWKTFTDCFNC 156
            |||..|:||..||:..|.:|.:...|:|||||...|.::|||||||.|:| :.::||..|:.|:.
 Worm    95 DRGYNSVETFILLMLLKCRYPDRITLIRGNHESRQITQVYGFYDECVRKYGSGQVWKHCTEIFDY 159

  Fly   157 LPVAAIVDEKIFCCHGGLSPDLSSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGENDRGV 221
            |.:||::|.|:||.||||||.:::::|||.:.|..:||.:|.:||||||||::...|||.:.||.
 Worm   160 LSLAAVIDGKLFCVHGGLSPSIATLDQIRVLDRKIEVPHEGPMCDLLWSDPEEGCSGWGISPRGA 224

  Fly   222 SFTFGAEVVGKFLQKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDDT 286
            .:.||.:....|.:.::|..||||||:|.:||:...::::||::||||||....|..|:|.|.:.
 Worm   225 GYLFGGDAAELFCENNDFLRICRAHQLVMEGYKLHFRKRVVTVWSAPNYCYRCGNVAAIMEVTEE 289

  Fly   287 LMCS---FQILKPA 297
            .:.|   |::.:.|
 Worm   290 NIDSDPVFEVFEAA 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1alpha-96ANP_001262919.1 MPP_PP1_PPKL 6..296 CDD:277359 123/271 (45%)
pph-4.2NP_001022898.1 PTZ00239 16..321 CDD:173488 124/274 (45%)
MPP_PP2A_PP4_PP6 16..303 CDD:277360 123/272 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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