DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp1alpha-96A and F26B1.5

DIOPT Version :9

Sequence 1:NP_001262919.1 Gene:Pp1alpha-96A / 42922 FlyBaseID:FBgn0003134 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001040654.1 Gene:F26B1.5 / 172328 WormBaseID:WBGene00017817 Length:383 Species:Caenorhabditis elegans


Alignment Length:310 Identity:110/310 - (35%)
Similarity:164/310 - (52%) Gaps:50/310 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 ESEIRSLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLF---------------EYGGF 79
            :|::..|..:..|:|..:..|..:..|:.|.|||||||.||:|:.               .|.  
 Worm    33 KSDLLLLIGQIMELFKMEKTLATISPPVTIVGDIHGQYPDLVRILNSRISKEEAKQKIVTSYS-- 95

  Fly    80 PPESNYLFLGDYVDRGKQSLETICLLLA---------------YKIKYAENFFLLRGNHECASIN 129
              .:.::|||||||||..|:|.|||:.|               ::|.|..||.|||||||..:||
 Worm    96 --SNRFVFLGDYVDRGNHSIECICLVFALKVLDLKFVSLLVIMFQIAYPTNFVLLRGNHETKAIN 158

  Fly   130 RIYGFYDECKRRYTIK----LWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLSSMEQIRRIMRP 190
            ..|||.:|.:.|...|    :|:.|.:.|:.:|:|.:|..:|.|.|||:|..|.|::.|..|:||
 Worm   159 FAYGFREELENRLGKKDGFEIWEKFNEVFSFMPLACLVGGRILCMHGGISEKLESLDSIDSIVRP 223

  Fly   191 -TDVPDQGLLCDLLWSDP--------DKDTMGWGEN-DRGVSFTFGAEVVGKFLQKHEFDLICRA 245
             .:|.|  |..|||||||        ..||..:.:| .||::.:|....|....::....|:.||
 Worm   224 LPEVTD--LAQDLLWSDPMDVQTLASISDTPKYAKNIVRGLAHSFNDAAVRDVCRRLNLHLVVRA 286

  Fly   246 HQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDDTLMCSFQILK 295
            ||::.:|::|.:.|:|:|:||||.|..|.||.||.:.||.....|..:::
 Worm   287 HQMIPEGFKFNSDRKLLTIFSAPRYMNESDNRGATLQVDVNGQLSISVMR 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1alpha-96ANP_001262919.1 MPP_PP1_PPKL 6..296 CDD:277359 110/310 (35%)
F26B1.5NP_001040654.1 PP2Ac 31..339 CDD:197547 110/310 (35%)
MPP_PPP_family 61..324 CDD:277316 101/268 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11668
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.