DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1alpha-96A and gsp-3

DIOPT Version :9

Sequence 1:NP_001262919.1 Gene:Pp1alpha-96A / 42922 FlyBaseID:FBgn0003134 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_491429.1 Gene:gsp-3 / 172082 WormBaseID:WBGene00021113 Length:305 Species:Caenorhabditis elegans


Alignment Length:301 Identity:159/301 - (52%)
Similarity:225/301 - (74%) Gaps:3/301 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDIMNIDSIISRLLEVRGARPGK-NVQLSESEIRSLCLKSREIFLSQPILLELEAPLKICGDIH 64
            |:..|::|:::||||.| |...|: ...::|.|:::.|..::.:|.||..|||:|.|:.:|||||
 Worm     1 MTAPMDVDNLMSRLLNV-GMSGGRLTTSVNEQELQTCCAVAKSVFASQASLLEVEPPIIVCGDIH 64

  Fly    65 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYAENFFLLRGNHECASIN 129
            |||.||||:|:..||||:.|:||||||||||:|::|||||:|.:||||.||||:|||||||.:||
 Worm    65 GQYSDLLRIFDKNGFPPDVNFLFLGDYVDRGRQNIETICLMLCFKIKYPENFFMLRGNHECPAIN 129

  Fly   130 RIYGFYDECKRRY-TIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLSSMEQIRRIMRPTDV 193
            |:||||:||.||| :.:||..|.|.||.:|:..::..:|.|.||||||.|.:::|:|::.||.|.
 Worm   130 RVYGFYEECNRRYKSTRLWSIFQDTFNWMPLCGLIGSRILCMHGGLSPHLQTLDQLRQLPRPQDP 194

  Fly   194 PDQGLLCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVGKFLQKHEFDLICRAHQVVEDGYEFFAK 258
            |:..:..||||:|||:...||..|.||||:.||.:||.....:.:.||:.||||||:|||||||.
 Worm   195 PNPSIGIDLLWADPDQWVKGWQANTRGVSYVFGQDVVADVCSRLDIDLVARAHQVVQDGYEFFAS 259

  Fly   259 RQLVTLFSAPNYCGEFDNAGAMMSVDDTLMCSFQILKPADK 299
            :::||:||||:|||:|||:.|.|.||:.::|:|.:.||..|
 Worm   260 KKMVTIFSAPHYCGQFDNSAATMKVDENMVCTFVMYKPTPK 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1alpha-96ANP_001262919.1 MPP_PP1_PPKL 6..296 CDD:277359 154/291 (53%)
gsp-3NP_491429.1 MPP_superfamily 6..297 CDD:301300 154/291 (53%)
PP2Ac 29..299 CDD:197547 148/269 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 1 1.010 - - D327461at33208
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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