DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp1alpha-96A and Ppp3cc

DIOPT Version :10

Sequence 1:NP_524484.1 Gene:Pp1alpha-96A / 42922 FlyBaseID:FBgn0003134 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_008769035.1 Gene:Ppp3cc / 171378 RGDID:621616 Length:515 Species:Rattus norvegicus


Alignment Length:311 Identity:113/311 - (36%)
Similarity:175/311 - (56%) Gaps:38/311 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KNVQLSESEI-RSLCLK----SREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 83
            ||..:.|..: ..:.||    ...|...:..:||:|||:.:|||:|||::||::|||.||.|..:
  Rat    43 KNHLVKEGRVEEDVALKIINDGAAILKQEKTMLEVEAPITVCGDVHGQFFDLMKLFEVGGSPSNT 107

  Fly    84 NYLFLGDYVDRGKQSLETICLLLAYKIKYAENFFLLRGNHECASINRIYGFYDECKRRYTIKLWK 148
            .|||||||||||..|:|.:..|.:.||.:.:..|||||||||..:...:.|..||:.:|:..:::
  Rat   108 RYLFLGDYVDRGYFSIECVLYLWSLKINHPKTLFLLRGNHECRHLTEYFTFKQECRIKYSELVYE 172

  Fly   149 TFTDCFNCLPVAAIVDEKIFCCHGGLSPDLSSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMG 213
            .....|:|||:||:::::..|.|||:||:::.::.||::.|..:.|..|.:||||||||.:|   
  Rat   173 ACMHTFDCLPLAALLNQQFLCVHGGMSPEITCLDDIRKLDRFAEPPAFGPVCDLLWSDPLED--- 234

  Fly   214 WGEND----------RGVSFTFGAEVVGKFLQKHEFDLICRAHQVVEDGYEFFAKRQ------LV 262
            :|...          ||.|:.|....|.:|||.:....|.|||:..:.||..:.|.|      |:
  Rat   235 YGSEKTLEHYTHNTVRGCSYFFSYPAVCEFLQNNSLLSIIRAHEAQDAGYRMYRKNQATGFPSLI 299

  Fly   263 TLFSAPNYCGEFDNAGAMMSVDDTLM------CSFQILKPADKRRFVYPNF 307
            |:||||||...::|..|::..::.:|      ||        ...:..|||
  Rat   300 TIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCS--------PHPYWLPNF 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1alpha-96ANP_524484.1 MPP_PP1_PPKL 6..296 CDD:277359 110/298 (37%)
Ppp3ccXP_008769035.1 MPP_PP2B 37..341 CDD:277361 110/308 (36%)

Return to query results.
Submit another query.