Sequence 1: | NP_524483.1 | Gene: | nAChRbeta2 / 42920 | FlyBaseID: | FBgn0004118 | Length: | 519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006243083.1 | Gene: | Htr3a / 79246 | RGDID: | 61818 | Length: | 488 | Species: | Rattus norvegicus |
Alignment Length: | 507 | Identity: | 135/507 - (26%) |
---|---|---|---|
Similarity: | 244/507 - (48%) | Gaps: | 68/507 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 LLCVFLLVPL------------ANSTAPISFEANPDTKRLYDDLLSNYNRLIRPVVNNTETLTVW 58
Fly 59 LGLKLSQLIEVNLKNQVMTTNLWVKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYNNWD 123
Fly 124 GNYEVTLMTKATLKYT-----GEVFWEPPAIYKSSCEMNVEYFPYDEQICFMKFGSWTYNGAQVD 183
Fly 184 LKHLDQIPGSNLVQVGIDLTEFYLSVEWDILEVPATKNEEYYPDTLEPFSDITFKLTMRRKTLFY 248
Fly 249 TVNLIVPCVALTFLTVLVFYLPSDSGEKVTLCISILVSLTVFFLLLAEIIPPTSLAVPLLGKYLL 313
Fly 314 FTMILVSLSVWTTVCVLNIHFRSPSTHNMSPLVRKLFL---------------HFMPKLMMMRRT 363
Fly 364 QYTLPDYDDSTPSNGYTNEIDVRDSISDFPSEFKDSQDGAYDNGMQNSVDSDNVIPRNLTPEVLQ 428
Fly 429 ALRAVRFIAQHIKDADKDNEIVEDWKFVSMVLDRFFLWLFTLSCVFGTLAII 480 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta2 | NP_524483.1 | LIC | 9..479 | CDD:273305 | 133/501 (27%) |
LGIC_ECD_nAChR_proto_alpha-like | 29..247 | CDD:349832 | 67/222 (30%) | ||
Htr3a | XP_006243083.1 | LIC | 5..482 | CDD:273305 | 135/507 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |