Sequence 1: | NP_524483.1 | Gene: | nAChRbeta2 / 42920 | FlyBaseID: | FBgn0004118 | Length: | 519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001303470.1 | Gene: | pHCl-2 / 43703 | FlyBaseID: | FBgn0039840 | Length: | 526 | Species: | Drosophila melanogaster |
Alignment Length: | 511 | Identity: | 117/511 - (22%) |
---|---|---|---|
Similarity: | 187/511 - (36%) | Gaps: | 151/511 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 41 YNRLIRPVVNNTETLTVWLGLKLSQLIEV--NLKNQVM--TTNLWVKQRWFDYKLRWDPEEYGGV 101
Fly 102 EQLYVPSEH------------IWVPDIVLYNNWDGNY--------------EVTLMTKATLKYTG 140
Fly 141 EVFWEPPAIYKSSCEMNVEYFPYDEQICFMKFGSWTYNGAQVDLKHLDQIPGSNLVQVGIDLTEF 205
Fly 206 YL--SVEWDILEVPATKNEEYYP-DTLE-PFSDITFKLTMRRKTLFYTVNLIVPCVALTFLTVLV 266
Fly 267 FYLPSD-SGEKVTL-CISILVSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVSLS-VWTTVC 328
Fly 329 VL------------NIHFRSPSTHNMSPLVRKLFLH--FMPKLMMMRRTQYTLPDYDDSTPSNGY 379
Fly 380 TNEID-----------------VRDSISDFPSEFK-DSQDGAYDNGMQNSVDSDNVIP----RNL 422
Fly 423 TPEVLQALRAVRFIAQHIKDADKDNEIVEDWKFVSMVLDRFFLWLFTLS-CVFGTL 477 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta2 | NP_524483.1 | LIC | 9..479 | CDD:273305 | 117/511 (23%) |
LGIC_ECD_nAChR_proto_alpha-like | 29..247 | CDD:349832 | 61/239 (26%) | ||
pHCl-2 | NP_001303470.1 | LIC | 46..522 | CDD:273305 | 117/511 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447276 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |