Sequence 1: | NP_524483.1 | Gene: | nAChRbeta2 / 42920 | FlyBaseID: | FBgn0004118 | Length: | 519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_995675.1 | Gene: | nAChRalpha6 / 34304 | FlyBaseID: | FBgn0032151 | Length: | 523 | Species: | Drosophila melanogaster |
Alignment Length: | 538 | Identity: | 196/538 - (36%) |
---|---|---|---|
Similarity: | 298/538 - (55%) | Gaps: | 81/538 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 SLLCVFLLVPLANSTAPISFEA--NPDTKRLYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLI 67
Fly 68 EVNLKNQVMTTNLWVKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYNNWDGNYEVTLMT 132
Fly 133 KATLKYTGEVFWEPPAIYKSSCEMNVEYFPYDEQICFMKFGSWTYNGAQVDLKHLDQIPGSNLVQ 197
Fly 198 VGIDLTEFYLSVEWDILEVPATKNEEYYPDTLEPFSDITFKLTMRRKTLFYTVNLIVPCVALTFL 262
Fly 263 TVLVFYLPSDSGEKVTLCISILVSLTVFFLLLAEIIPPTSLAVPLLGKYLLFT------------ 315
Fly 316 -----------------MILVSLSVWTTVCVLNIHFRSPSTHNMSPLVRKLFLHFMPKLMMMRR- 362
Fly 363 ----TQYTLPDYDDSTPSNGYTNEIDVRD--------SISDFPSEFKDSQDGAYDNGMQNSVDSD 415
Fly 416 NVIPRNLTPE------------VLQALRAVRFIAQHIKDADKDNEIVEDWKFVSMVLDRFFLWLF 468
Fly 469 TLSCVFGTLAIICQSPSL 486 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta2 | NP_524483.1 | LIC | 9..479 | CDD:273305 | 193/525 (37%) |
LGIC_ECD_nAChR_proto_alpha-like | 29..247 | CDD:349832 | 95/217 (44%) | ||
nAChRalpha6 | NP_995675.1 | LIC | 11..517 | CDD:273305 | 193/530 (36%) |
LGIC_ECD_nAChR | 55..236 | CDD:349798 | 79/188 (42%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447305 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |