Sequence 1: | NP_524483.1 | Gene: | nAChRbeta2 / 42920 | FlyBaseID: | FBgn0004118 | Length: | 519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_998786.3 | Gene: | HTR3A / 3359 | HGNCID: | 5297 | Length: | 510 | Species: | Homo sapiens |
Alignment Length: | 524 | Identity: | 132/524 - (25%) |
---|---|---|---|
Similarity: | 253/524 - (48%) | Gaps: | 69/524 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MW-HWSLLCVFLLVPLANSTAPISFE-ANPDTKRLYDDLLSNYNRLIRPVVNNTETLTVWLGLKL 63
Fly 64 SQLIEVNLKNQVMTTNLWVKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYNNWDGNYEV 128
Fly 129 TLMTKATLKYT-----GEVFWEPPAIYKSSCEMNVEYFPYDEQICFMKFGSWTYNGAQVDLKHLD 188
Fly 189 QIPGSNLVQVGIDLTEFYLSVEWDILEV-PATKNEEYYPDTLEPFSDITFKLTMRRKTLFYTVNL 252
Fly 253 IVPCVALTFLTVLVFYLPSDSGEKVTLCISILVSLTVFFLLLAEIIPPTSLAVPLLGK------- 310
Fly 311 -------------------------YLLFTMILVSLSVWTTVCVLNIHFRSPSTHNMSPLVRKLF 350
Fly 351 LHFMPKLMMMRRTQYTLPDYDDST----PSNGYTNEIDVRDSISDFPSEFKDSQDGAYDNGMQNS 411
Fly 412 VDSDNVIPRNLTPEVLQALRAVRFIAQHIKDADKDNEIVEDWKFVSMVLDRFFLWLFTLSCVFGT 476
Fly 477 LAII 480 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta2 | NP_524483.1 | LIC | 9..479 | CDD:273305 | 129/512 (25%) |
LGIC_ECD_nAChR_proto_alpha-like | 29..247 | CDD:349832 | 65/223 (29%) | ||
HTR3A | NP_998786.3 | LIC | 23..504 | CDD:273305 | 126/504 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |