Sequence 1: | NP_524483.1 | Gene: | nAChRbeta2 / 42920 | FlyBaseID: | FBgn0004118 | Length: | 519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491354.2 | Gene: | acr-6 / 191479 | WormBaseID: | WBGene00000045 | Length: | 551 | Species: | Caenorhabditis elegans |
Alignment Length: | 556 | Identity: | 200/556 - (35%) |
---|---|---|---|
Similarity: | 314/556 - (56%) | Gaps: | 81/556 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 VFLLVPLANSTAPISFEANPDTKRLYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVNLKN 73
Fly 74 QVMTTNLWVKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYNNWDGNYEVTLMTKATLKY 138
Fly 139 TGEVFWEPPAIYKSSCEMNVEYFPYDEQICFMKFGSWTYNGAQVDLKHL--DQ------IPGSNL 195
Fly 196 --VQVGIDLTEFYLSVEWDILEVPATKNEEYYPDTLEPFSDITFKLTMRRKTLFYTVNLIVPCVA 258
Fly 259 LTFLTVLVFYLPSDSGEKVTLCISILVSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVSLSV 323
Fly 324 WTTVCVLNIHFRS---PSTHNMSPLVRKLFLHFM-PKLMMMRRT--------------------- 363
Fly 364 -------QYTLPDYDDSTPS-----------NGYTNEIDVRD-SISDFPSEFKDSQDGAYDNGMQ 409
Fly 410 N--SVDSDNVI----PRNLTPE-----------VLQALRAVRFIAQHIKDADKDNEIVEDWKFVS 457
Fly 458 MVLDRFFLWLFTLSCVFGTLAIICQSPSLYDTRSPI 493 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta2 | NP_524483.1 | LIC | 9..479 | CDD:273305 | 194/540 (36%) |
LGIC_ECD_nAChR_proto_alpha-like | 29..247 | CDD:349832 | 90/227 (40%) | ||
acr-6 | NP_491354.2 | Neur_chan_LBD | 23..244 | CDD:280998 | 87/220 (40%) |
Neur_chan_memb | 252..524 | CDD:280999 | 89/278 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.920 |