Sequence 1: | NP_524483.1 | Gene: | nAChRbeta2 / 42920 | FlyBaseID: | FBgn0004118 | Length: | 519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_504154.5 | Gene: | lgc-1 / 188099 | WormBaseID: | WBGene00020236 | Length: | 371 | Species: | Caenorhabditis elegans |
Alignment Length: | 340 | Identity: | 85/340 - (25%) |
---|---|---|---|
Similarity: | 154/340 - (45%) | Gaps: | 61/340 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 DTKRLYDDLLSNYNRLIRPV--------VNNTET---------LTVWLGLKLSQLIEVNLKNQVM 76
Fly 77 TTNLWVKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYNNWDGNYEVTLMTK------AT 135
Fly 136 LKYTGEVFWEPPAIYKSSCEMNVEYFPYDEQICFMKFGSWTYNGAQVDLK-HLDQIPGSNLVQVG 199
Fly 200 IDLTEFYLSVEWDILEVPATKNEEYYPDTLEPFSDITFKLTMR------RKTLFYTVNLIVPCVA 258
Fly 259 LTFLTVLVFYLPSDS-GEKVTLCISILVSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILV--S 320
Fly 321 LSVWTTVCVLNIHFR 335 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta2 | NP_524483.1 | LIC | 9..479 | CDD:273305 | 85/340 (25%) |
LGIC_ECD_nAChR_proto_alpha-like | 29..247 | CDD:349832 | 60/247 (24%) | ||
lgc-1 | NP_504154.5 | Neur_chan_LBD | 84..>335 | CDD:332142 | 65/267 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |